RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 TRAPPC13A5PLN9 417 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 CPSF4LA6NMK7 179 aaKnown RBP14.36□□□□□ -0.11
CIT-212ENST00000543239 IGHV1-2P23083 117 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 KDELR2P33947 212 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 SLC7A2P52569 658 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 LIPEQ05469 1076 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 TSC22D1Q15714 1073 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 BEX5Q5H9J7 111 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 LINC00114Q6XXX2 140 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 GPAT4Q86UL3 456 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 RBM45Q8IUH3 476 aaKnown RBP14.36□□□□□ -0.11
CIT-212ENST00000543239 ZIC4Q8N9L1 334 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 ADPRHL1Q8NDY3 354 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 HSD17B8Q92506 261 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 NRGNQ92686 78 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 PIK3IP1Q96FE7 263 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 MPP4Q96JB8 637 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 POLR2J2Q9GZM3 115 aaKnown RBP14.36□□□□□ -0.11
CIT-212ENST00000543239 POLR2J3Q9H1A7 115 aaKnown RBP14.36□□□□□ -0.11
CIT-212ENST00000543239 ASB6Q9NWX5 421 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 B3GALT5Q9Y2C3 310 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 CORINQ9Y5Q5 1042 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 FREM1Q5H8C1 2179 aa14.36□□□□□ -0.11
CIT-212ENST00000543239 A0A1W2PPR1 153 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 NME4O00746 187 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 KLF4O43474 513 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 LYZL6O75951 148 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 IGHV3-9P01782 118 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 GGT1P19440 569 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 NR1H2P55055 460 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 LRRC23Q53EV4 343 aaPredicted RBP14.35□□□□□ -0.11
CIT-212ENST00000543239 CYBRD1Q53TN4 286 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 PAMR1Q6UXH9 720 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 CREB3L2Q70SY1 520 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 AAED1Q7RTV5 226 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 P2RY8Q86VZ1 359 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 CARM1Q86X55 608 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 WFDC8Q8IUA0 241 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 ZNF433Q8N7K0 673 aaPredicted RBP14.35□□□□□ -0.11
CIT-212ENST00000543239 SLC41A3Q96GZ6 507 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 ZNF385AQ96PM9 386 aaKnown RBP14.35□□□□□ -0.11
CIT-212ENST00000543239 LIME1Q9H400 295 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 ALG2Q9H553 416 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 NGBQ9NPG2 151 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 TAS2R16Q9NYV7 291 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 ABCD2Q9UBJ2 740 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 SH3GLB1Q9Y371 365 aa14.35□□□□□ -0.11
CIT-212ENST00000543239 LOC102725191A0A1B0GVB3 256 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.34□□□□□ -0.11
CIT-212ENST00000543239 M0R082 166 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 PDLIM1O00151 329 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 DCTN3O75935 186 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 LYPD3O95274 346 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 MT-ATP6P00846 226 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 BGLAPP02818 100 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 LOXP28300 417 aaPredicted RBP14.34□□□□□ -0.11
CIT-212ENST00000543239 GRPRP30550 384 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 SELENOWP63302 87 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 TAB1Q15750 504 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 TIMM23BQ5SRD1 257 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 H1FNTQ75WM6 255 aaPredicted RBP14.34□□□□□ -0.11
CIT-212ENST00000543239 P3H2Q8IVL5 708 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 SCAIQ8N9R8 606 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 POMGNT2Q8NAT1 580 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 ZNF417Q8TAU3 575 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 LZICQ8WZA0 190 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 OXGR1Q96P68 337 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 LRRC37BQ96QE4 947 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 ZNF587Q96SQ5 575 aaPredicted RBP14.34□□□□□ -0.11
CIT-212ENST00000543239 ZNF426Q9BUY5 554 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 SLC19A3Q9BZV2 496 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 SLCO5A1Q9H2Y9 848 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 SLC7A10Q9NS82 523 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 UPB1Q9UBR1 384 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 SLC7A7Q9UM01 511 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 SPG11Q96JI7 2443 aa14.34□□□□□ -0.11
CIT-212ENST00000543239 ABCA4P78363 2273 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 OR6C65A6NJZ3 312 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 OR5H1A6NKK0 313 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 RAF1P04049 648 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 THY1P04216 161 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 ZNF43P17038 809 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 DNASE1P24855 282 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 GSK3BP49841 420 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 PSME3P61289 254 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 FAPQ12884 760 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 TSPO2Q5TGU0 170 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 OR7E24Q6IFN5 339 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 TTC33Q6PID6 262 aaPredicted RBP14.33□□□□□ -0.12
CIT-212ENST00000543239 ABHD12BQ7Z5M8 362 aaPredicted RBP14.33□□□□□ -0.12
CIT-212ENST00000543239 TSPYL5Q86VY4 417 aaPredicted RBP14.33□□□□□ -0.12
CIT-212ENST00000543239 EPHX4Q8IUS5 362 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 ANKS4BQ8N8V4 417 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 C1orf162Q8NEQ5 155 aaPredicted RBP14.33□□□□□ -0.12
CIT-212ENST00000543239 HS3ST6Q96QI5 342 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 ASPNQ9BXN1 380 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 AMBRA1Q9C0C7 1298 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 SPAG4Q9NPE6 437 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 B3GAT1Q9P2W7 334 aa14.33□□□□□ -0.12
CIT-212ENST00000543239 SEC14L4Q9UDX3 406 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms