RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 OR4D9Q8NGE8 314 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 OR10V1Q8NGI7 309 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 OR13F1Q8NGS4 319 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 GPX8Q8TED1 209 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 GLYATL2Q8WU03 294 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 UBE2E3Q969T4 207 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SGK3Q96BR1 496 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF524Q96C55 264 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 OPTNQ96CV9 577 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 NUS1Q96E22 293 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 PPP1R16AQ96I34 528 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SERAC1Q96JX3 654 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF778Q96MU6 729 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 OR5B2Q96R09 309 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 CLCC1Q96S66 551 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 BLZF1Q9H2G9 400 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ANKRD19PQ9H560 264 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SP140LQ9H930 580 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 NMRAL1Q9HBL8 299 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF334Q9HCZ1 680 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 DMAP1Q9NPF5 467 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 LZTFL1Q9NQ48 299 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 BFARQ9NZS9 450 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 STK38LQ9Y2H1 464 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 MAP2P11137 1827 aaKnown RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 DLEC1Q9Y238 1755 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SPTBN5Q9NRC6 3674 aaKnown RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 LAMA3Q16787 3333 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 CEMIPQ8WUJ3 1361 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 LAMA4Q16363 1823 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 VCANP13611 3396 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 IGHV3-38A0A0C4DH36 116 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 IGHV2-70DA0A0C4DH43 119 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TRBV11-1A0A0K0K1C0 115 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 A0A1W2PPV9 198 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 FAM172BPA6NC97 362 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 SLCO1B7G3V0H7 640 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 NDUFAB1O14561 156 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TRDMT1O14717 391 aaKnown RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 NVLO15381 856 aaKnown RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TYROBPO43914 113 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 SMIM24O75264 130 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 OR2F2O95006 317 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 CLDN1O95832 211 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 SERPINB2P05120 415 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 SERPIND1P05546 499 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 CRYGCP07315 174 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 ERCC1P07992 297 aaPredicted RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 WNT2P09544 360 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 HSD17B1P14061 328 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 PLA2G2AP14555 144 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 SDC1P18827 310 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TUBG1P23258 451 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 S100A1P23297 94 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 MAP3K8P41279 467 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 QARSP47897 775 aaKnown RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 CCNG1P51959 295 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 LINC00205P59089 165 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 NDUFA9Q16795 377 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 HLA-BQ31612 363 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 CCDC153Q494R4 210 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TIGITQ495A1 244 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 GLYR1Q49A26 553 aaPredicted RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TTMPQ5BVD1 217 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 MUC21Q5SSG8 566 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 C1orf220Q5T0J3 134 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 PVRIGQ6DKI7 326 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 SLC8B1Q6J4K2 584 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 Q6ZRP5 223 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 C3orf62Q6ZUJ4 267 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 VTCN1Q7Z7D3 282 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TPRA1Q86W33 373 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 CARM1Q86X55 608 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 HPS6Q86YV9 775 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 ERI1Q8IV48 349 aaKnown RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 MICU2Q8IYU8 434 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 KIR3DL3Q8N743 410 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 ATP6V0D2Q8N8Y2 350 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 OR2T33Q8NG76 320 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 LMO3Q8TAP4 145 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 SUN5Q8TC36 379 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 FAM110BQ8TC76 370 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 FNDC8Q8TC99 324 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 IL1F10Q8WWZ1 152 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 NRGNQ92686 78 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF707Q96C28 371 aaPredicted RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 MOCOSQ96EN8 888 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 C8orf76Q96K31 380 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF578Q96N58 590 aaPredicted RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 CLEC7AQ9BXN2 247 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 DGCR6LQ9BY27 220 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 ANKRD60Q9BZ19 345 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 RHBGQ9H310 441 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 GLIPR2Q9H4G4 154 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 RGCCQ9H4X1 137 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 PARVGQ9HBI0 331 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 MEPEQ9NQ76 525 aaPredicted RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 SPHK2Q9NRA0 654 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms