RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 S100A14Q9HCY8 104 aa15.3■□□□□ 0.04
LIG1-204ENST00000542460 C6orf203Q9P0P8 240 aaPredicted RBP15.3■□□□□ 0.04
LIG1-204ENST00000542460 TMEM5Q9Y2B1 443 aa15.3■□□□□ 0.04
LIG1-204ENST00000542460 B3GALT5Q9Y2C3 310 aa15.3■□□□□ 0.04
LIG1-204ENST00000542460 MYO18BQ8IUG5 2567 aa15.3■□□□□ 0.04
LIG1-204ENST00000542460 AQP7P3A6NL99 342 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 H3BNX3 289 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 M0R082 166 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 CYTIPO60759 359 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 E2F6O75461 281 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 OR7A10O76100 309 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 RCBTB2O95199 551 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 IL2RAP01589 272 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 HIST1H2ABP04908 130 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 PPP1R8Q12972 351 aaKnown RBP15.29■□□□□ 0.04
LIG1-204ENST00000542460 RNPS1Q15287 305 aaKnown RBP15.29■□□□□ 0.04
LIG1-204ENST00000542460 MICAQ29983 383 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 MTFR2Q6P444 385 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 TMPRSS11FQ6ZWK6 438 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 H1FNTQ75WM6 255 aaPredicted RBP15.29■□□□□ 0.04
LIG1-204ENST00000542460 HIST3H2AQ7L7L0 130 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 SLC46A3Q7Z3Q1 461 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 FJX1Q86VR8 437 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 MARVELD2Q8N4S9 558 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 LRRC17Q8N6Y2 441 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 C9orf106Q8NAJ2 232 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 ZNF417Q8TAU3 575 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 LRTOMTQ8WZ04 291 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 HIST1H2ACQ93077 130 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 ZNF587Q96SQ5 575 aaPredicted RBP15.29■□□□□ 0.04
LIG1-204ENST00000542460 BDH2Q9BUT1 245 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 GLRX2Q9NS18 164 aa15.29■□□□□ 0.04
LIG1-204ENST00000542460 MRPL39Q9NYK5 338 aaKnown RBP15.29■□□□□ 0.04
LIG1-204ENST00000542460 ASH1LQ9NR48 2969 aaKnown RBP15.29■□□□□ 0.04
LIG1-204ENST00000542460 ZNF814B7Z6K7 855 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 TOXO94900 526 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 CCNB2O95067 398 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 VAMP5O95183 116 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 ASAH2BP0C7U1 165 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 KLK2P20151 261 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 MAKP20794 623 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 CEACAM8P31997 349 aaPredicted RBP15.28■□□□□ 0.04
LIG1-204ENST00000542460 OMPP47874 163 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 ARHGDIAP52565 204 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 PER3P56645 1201 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 PMS2P3Q13401 168 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 RIPPLY2Q5TAB7 128 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 TMEM225Q6GV28 225 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 ABLIM2Q6H8Q1 611 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 CCDC103Q8IW40 242 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 MCEMP1Q8IX19 187 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 ADPRHL1Q8NDY3 354 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 OR5J2Q8NH18 312 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 ZFP3Q96NJ6 502 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 NTN4Q9HB63 628 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 CHST11Q9NPF2 352 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 KLHL9Q9P2J3 617 aa15.28■□□□□ 0.04
LIG1-204ENST00000542460 EFCAB9A8MZ26 197 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 PLGP00747 810 aaPredicted RBP15.27■□□□□ 0.04
LIG1-204ENST00000542460 SAGP10523 405 aaPredicted RBP15.27■□□□□ 0.04
LIG1-204ENST00000542460 P2RY4P51582 365 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 IST1P53990 364 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 RASGEF1BQ0VAM2 473 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 PDK3Q15120 406 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 C1orf94Q6P1W5 598 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 ZER1Q7Z7L7 766 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 ABHD3Q8WU67 409 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 RND1Q92730 232 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 CENPNQ96H22 339 aaPredicted RBP15.27■□□□□ 0.04
LIG1-204ENST00000542460 GMPPAQ96IJ6 420 aaPredicted RBP15.27■□□□□ 0.04
LIG1-204ENST00000542460 FAM46AQ96IP4 442 aaKnown RBP15.27■□□□□ 0.04
LIG1-204ENST00000542460 SF3B5Q9BWJ5 86 aaKnown RBP15.27■□□□□ 0.04
LIG1-204ENST00000542460 GP6Q9HCN6 339 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 SEC14L4Q9UDX3 406 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 RASD1Q9Y272 281 aa15.27■□□□□ 0.04
LIG1-204ENST00000542460 SETXQ7Z333 2677 aaKnown RBP15.27■□□□□ 0.04
LIG1-204ENST00000542460 RAMP1O60894 148 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 CRHP06850 196 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 GPR4P46093 362 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 SLC9A3P48764 834 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 LAPTM4AQ15012 233 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 ANKDD1AQ495B1 522 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 ZNF770Q6IQ21 691 aaPredicted RBP15.27■□□□□ 0.03
LIG1-204ENST00000542460 NANOGNBQ7Z5D8 188 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 TMEM179BQ7Z7N9 219 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 AMIGO2Q86SJ2 522 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 GIPC3Q8TF64 312 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 INTS12Q96CB8 462 aaKnown RBP15.27■□□□□ 0.03
LIG1-204ENST00000542460 NRBF2Q96F24 287 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 PSD2Q9BQI7 771 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 KLHL13Q9P2N7 655 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 SLC5A6Q9Y289 635 aa15.27■□□□□ 0.03
LIG1-204ENST00000542460 UBR5O95071 2799 aaPredicted RBP15.27■□□□□ 0.03
LIG1-204ENST00000542460 ARRDC5A6NEK1 342 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 ZNF716A6NP11 495 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 HSPB2A8KAH6 182 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 BLOC1S5-TXNDC5H3BN57 136 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 PLPP3O14495 311 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 CDC42EP2O14613 210 aa15.26■□□□□ 0.03
LIG1-204ENST00000542460 OR6A2O95222 327 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms