RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ICE1Q9Y2F5 2266 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 KIR2DS5A0A0G2JLQ3 304 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 A0A0G2JNG1 304 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 METTL21EPA6NDL7 271 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 KIR2DS3K7RE56 304 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 F10P00742 488 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 IGHA2P01877 340 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 EVI2BP34910 448 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 FRKP42685 505 aaPredicted RBP14.84□□□□□ -0.03
VARS2-212ENST00000542001 CRYBB2P43320 205 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 MVDP53602 400 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 TLE3Q04726 772 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 EIF2B1Q14232 305 aaKnown RBP14.84□□□□□ -0.03
VARS2-212ENST00000542001 GPR176Q14439 515 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 KIR2DS5Q14953 304 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 SLC6A19Q695T7 634 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 CAMKMTQ7Z624 323 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 ZNF615Q8N8J6 731 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 ATOH1Q92858 354 aaPredicted RBP14.84□□□□□ -0.03
VARS2-212ENST00000542001 NXPE2Q96DL1 559 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 LINC00615Q96LM1 132 aaPredicted RBP14.84□□□□□ -0.03
VARS2-212ENST00000542001 SLC2A1P11166 492 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 COL9A1P20849 921 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 SGCBQ16585 318 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 GLT8D1Q68CQ7 371 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 ELP2Q6IA86 826 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 KIF18BQ86Y91 864 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 ETFBKMTQ8IXQ9 262 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 PLPP7Q8NBV4 271 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 EMC6Q9BV81 110 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 TEX101Q9BY14 249 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 PPP4R1LQ9P1A2 415 aa14.84□□□□□ -0.03
VARS2-212ENST00000542001 APOC3P02656 99 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 CD38P28907 300 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 POU3F1Q03052 451 aaPredicted RBP14.83□□□□□ -0.03
VARS2-212ENST00000542001 POU4F2Q12837 409 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 PRAMEF20Q5VT98 475 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 EEF1A1P5Q5VTE0 462 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 PRAMEF8Q5VWM4 474 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 PRAMEF7Q5VXH5 474 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 HBMQ6B0K9 141 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 QSOX2Q6ZRP7 698 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 MAMDC2Q7Z304 686 aaPredicted RBP14.83□□□□□ -0.03
VARS2-212ENST00000542001 VN1R4Q7Z5H5 301 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 LILRB4Q8NHJ6 448 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 INTS14Q96SY0 518 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 OR11A1Q9GZK7 315 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 SRRQ9GZT4 340 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 SLC6A15Q9H2J7 730 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 CCDC86Q9H6F5 360 aaKnown RBP14.83□□□□□ -0.03
VARS2-212ENST00000542001 UBQLN4Q9NRR5 601 aa14.83□□□□□ -0.03
VARS2-212ENST00000542001 TESQ9UGI8 421 aaKnown RBP14.83□□□□□ -0.03
VARS2-212ENST00000542001 C19orf53Q9UNZ5 99 aaPredicted RBP14.83□□□□□ -0.03
VARS2-212ENST00000542001 SURF4O15260 269 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 FOXL2P58012 376 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 KIRREL2Q6UWL6 708 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 LRRC69Q6ZNQ3 347 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 ZNF701Q9NV72 531 aaPredicted RBP14.83□□□□□ -0.04
VARS2-212ENST00000542001 MAB21L2Q9Y586 359 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 A0A1B0GTH9 108 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 A0A1B0GV50 99 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 TMEM129A0AVI4 362 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 TLX3O43711 291 aaPredicted RBP14.83□□□□□ -0.04
VARS2-212ENST00000542001 DUX1O43812 170 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 EIF4EP06730 217 aaKnown RBP14.83□□□□□ -0.04
VARS2-212ENST00000542001 PCBP4P57723 403 aaKnown RBP14.83□□□□□ -0.04
VARS2-212ENST00000542001 PM20D2Q8IYS1 436 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 ACBD4Q8NC06 268 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 RNF170Q96K19 258 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 HCAR1Q9BXC0 346 aa14.83□□□□□ -0.04
VARS2-212ENST00000542001 ZNF264O43296 627 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 GPANK1O95872 356 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 LALBAP00709 142 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 CPEP16870 476 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 CLRN1P58418 232 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 DUSP6Q16828 381 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 LIPNQ5VXI9 398 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 OR5D18Q8NGL1 313 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 OR5M1Q8NGP8 315 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 GPR148Q8TDV2 347 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 ASB12Q8WXK4 309 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 SLC25A44Q96H78 314 aaPredicted RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 OR2A14Q96R47 310 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 F5H5K5 113 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 GOSR2O14653 212 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 OR1D5P58170 312 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 RRAS2P62070 204 aaPredicted RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 GLYR1Q49A26 553 aaPredicted RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 NIPAL3Q6P499 406 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 ZAR1Q86SH2 424 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 ZNF584Q8IVC4 421 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 CCDC28AQ8IWP9 274 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 SEC22AQ96IW7 307 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 KLHL15Q96M94 604 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 BARHL1Q9BZE3 327 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 TMEM14AQ9Y6G1 99 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 ARHGEF17Q96PE2 2063 aaPredicted RBP14.82□□□□□ -0.04
VARS2-212ENST00000542001 PRSS3P35030 304 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 RAB38P57729 211 aa14.82□□□□□ -0.04
VARS2-212ENST00000542001 PRPS1P60891 318 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms