RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TPTEP56180 551 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 OC90Q02509 493 aaPredicted RBP7□□□□□ -1.29
AC005840.3-201ENST00000541888 KRR1Q13601 381 aaKnown RBP7□□□□□ -1.29
AC005840.3-201ENST00000541888 QPRTQ15274 297 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 EXT1Q16394 746 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 DGUOKQ16854 277 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 ZNF791Q3KP31 576 aaPredicted RBP7□□□□□ -1.29
AC005840.3-201ENST00000541888 ACER2Q5QJU3 275 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 DCAF10Q5QP82 559 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 SLC35F1Q5T1Q4 408 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 ZNF691Q5VV52 312 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 ACSM5Q6NUN0 579 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 SMARCD3Q6STE5 483 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 PRSS48Q7RTY5 328 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 GRAMD2AQ8IUY3 354 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 IQCF2Q8IXL9 164 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 ENTHD1Q8IYW4 607 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 SLC7A5P1Q8MH63 180 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 C8orf59Q8N0T1 100 aaPredicted RBP7□□□□□ -1.29
AC005840.3-201ENST00000541888 MFSD4AQ8N468 514 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 C17orf47Q8NEP4 570 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 OR5L2Q8NGL0 311 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 MUL1Q969V5 352 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 BPIFA2Q96DR5 249 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 KTI12Q96EK9 354 aaPredicted RBP7□□□□□ -1.29
AC005840.3-201ENST00000541888 MED30Q96HR3 178 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 SIGLEC12Q96PQ1 595 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 ZNF559Q9BR84 538 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 UCK2Q9BZX2 261 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 ING2Q9H160 280 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 C12orf49Q9H741 205 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 TMEM27Q9HBJ8 222 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 KLHL1Q9NR64 748 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 PAK1IP1Q9NWT1 392 aaPredicted RBP7□□□□□ -1.29
AC005840.3-201ENST00000541888 MRTO4Q9UKD2 239 aaKnown RBP7□□□□□ -1.29
AC005840.3-201ENST00000541888 RNF6Q9Y252 685 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 SLC35A3Q9Y2D2 325 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 POFUT2Q9Y2G5 429 aa7□□□□□ -1.29
AC005840.3-201ENST00000541888 C21orf140B9A014 251 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 PTGES3LE9PB15 166 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 H3BML4 177 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 IMPA2O14732 288 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 CHP2O43745 196 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 DPM1O60762 260 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 SOX30O94993 753 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 PTTG1O95997 202 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 HPP00738 406 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 GAS1P54826 345 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 MLF1P58340 268 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 ISL1P61371 349 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 COPZ1P61923 177 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 MVKQ03426 396 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 EGR4Q05215 589 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 CD300CQ08708 224 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 CDK5R2Q13319 367 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 NTRK2Q16620 822 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 ZNF181Q2M3W8 571 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 XAF1Q6GPH4 301 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 C1orf94Q6P1W5 598 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 B3GLCTQ6Y288 498 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 MBOAT2Q6ZWT7 520 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 ZNF227Q86WZ6 799 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 C10orf53Q8N6V4 93 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 BPIFB6Q8NFQ5 453 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 PIGXQ8TBF5 258 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 M1APQ8TC57 530 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 SLC22A8Q8TCC7 542 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 APH1BQ8WW43 257 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 SAMD8Q96LT4 415 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 GPR87Q9BY21 358 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 GABARAPL3Q9BY60 117 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 PROK2Q9HC23 129 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 DEPPQ9NTK1 212 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 HPF1Q9NWY4 346 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 PPP4R1LQ9P1A2 415 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 NDRG4Q9ULP0 352 aaKnown RBP6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 UGT2A1Q9Y4X1 527 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 DNAJC13O75165 2243 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 NCOR2Q9Y618 2525 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 RELNP78509 3460 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 PINLYPA6NC86 204 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 FAM183AA6NL82 134 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 TLX3O43711 291 aaPredicted RBP6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 WBP4O75554 376 aaKnown RBP6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 ADRA2AP08913 450 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 CRISP1P54107 249 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 IFITM2Q01629 132 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 FOXF1Q12946 379 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 TOMM20Q15388 145 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 SF3B4Q15427 424 aaKnown RBP eCLIP6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 TTC23Q5W5X9 447 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 ULK3Q6PHR2 472 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 PLXDC2Q6UX71 529 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 ZNF550Q7Z398 422 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 ATG4DQ86TL0 474 aaPredicted RBP6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 CYP4Z2PQ8N1L4 340 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 LSMEM1Q8N8F7 131 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 WDSUB1Q8N9V3 476 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 OR6Q1Q8NGQ2 317 aa6.99□□□□□ -1.29
AC005840.3-201ENST00000541888 OR4Q3Q8NH05 313 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms