RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 KCNJ15Q99712 375 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 ALG8Q9BVK2 526 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 SCPEP1Q9HB40 452 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 PRDM7Q9NQW5 492 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 FBXL4Q9UKA2 621 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 RASD1Q9Y272 281 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 ASB4Q9Y574 426 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 OR2W5A6NFC9 320 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 E9PI62 339 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 SURF4O15260 269 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 LDB3O75112 727 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 ZNF888P0CJ79 500 aaPredicted RBP13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 ST6GAL1P15907 406 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 BTCP35070 178 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 BLVRAP53004 296 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 DGCR2P98153 550 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 PLA1AQ53H76 456 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 CDC73Q6P1J9 531 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 RELL2Q8NC24 303 aaPredicted RBP13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 ACOT11Q8WXI4 607 aaPredicted RBP13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 DIO2Q92813 273 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 DLL4Q9NR61 685 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 FBXO34Q9NWN3 711 aa13.16□□□□□ -0.3
SFSWAP-210ENST00000541286 PMS2P1A4D2B8 440 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 GPR89AB7ZAQ6 455 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 H3BSH0 61 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 DLL1O00548 723 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 SEC14L5O43304 696 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 CHST10O43529 356 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 GPR89BP0CG08 455 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 UBE2MP61081 183 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 Q6ZTK2 550 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 CEACAM19Q7Z692 300 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 GPALPP1Q8IXQ4 340 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 ACBD7Q8N6N7 88 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 SUMF1Q8NBK3 374 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 OR52L1Q8NGH7 329 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 OR52D1Q9H346 318 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 UBQLN3Q9H347 655 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 FGF20Q9NP95 211 aaPredicted RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 C20orf141Q9NUB4 165 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 MRPL39Q9NYK5 338 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 CHST2Q9Y4C5 530 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 LY6G6EA0A0G2JKS1 128 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 TRDV1A0A1B0GX56 115 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 KHNYNO15037 678 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 UCHL1P09936 223 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 UGT2B7P16662 529 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 LCN1P31025 176 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 ZNF155Q12901 538 aaPredicted RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 OPCMLQ14982 345 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 TRMT12Q53H54 448 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 SLC48A1Q6P1K1 146 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 ZNF322Q6U7Q0 402 aaPredicted RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 LINC00471Q8N535 108 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 OR2L5Q8NG80 312 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 OR2L3Q8NG85 312 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 OR10Z1Q8NGY1 313 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 RELTQ969Z4 430 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 CCDC74AQ96AQ1 378 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 C12orf57Q99622 126 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 ZNF416Q9BWM5 594 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 PCDHB16Q9NRJ7 776 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 ZMAT5Q9UDW3 170 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 U3KQA8 63 aa13.15□□□□□ -0.3
SFSWAP-210ENST00000541286 A0A1B0GTQ1 180 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 IRGMA1A4Y4 181 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 THY1P04216 161 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 PYCR1P32322 319 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 CSF2RBP32927 897 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 HSD17B2P37059 387 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 FRKP42685 505 aaPredicted RBP13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 AKR1C2P52895 323 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 AKR1C1Q04828 323 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 TCTE1Q5JU00 501 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 GKN2Q86XP6 184 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 OR13C2Q8NGS9 318 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 FANK1Q8TC84 345 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 ZCCHC4Q9H5U6 513 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 CBLCQ9ULV8 474 aa13.15□□□□□ -0.31
SFSWAP-210ENST00000541286 SLC9B1P1A6NJY1 282 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 PSMD9O00233 223 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 PEX12O00623 359 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 CDX4O14627 284 aaPredicted RBP13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 PDCD5O14737 125 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 TRIM3O75382 744 aaPredicted RBP13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 ZP1P60852 638 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 E2F1Q01094 437 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 AADACL4Q5VUY2 407 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 PRSS41Q7RTY9 318 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 ORAI1Q96D31 301 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 ZC3HAV1LQ96H79 300 aaKnown RBP13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 CCDC86Q9H6F5 360 aaKnown RBP13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 BCL2L10Q9HD36 194 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 FANCFQ9NPI8 374 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 HPF1Q9NWY4 346 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms