RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 EEF1E1-BLOC1S5C9J1V9 151 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 EEF1E1O43324 174 aaKnown RBP16.72■□□□□ 0.27
VPS33A-205ENST00000541169 KRT36O76013 467 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 AKR7A3O95154 331 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 H1F0P07305 194 aaKnown RBP16.72■□□□□ 0.27
VPS33A-205ENST00000541169 MS4A2Q01362 244 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 GK3PQ14409 553 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 SLC17A1Q14916 467 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 ANKDD1AQ495B1 522 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 BEND4Q6ZU67 534 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 YTHDF3Q7Z739 585 aaKnown RBP16.72■□□□□ 0.27
VPS33A-205ENST00000541169 TSPYL5Q86VY4 417 aaPredicted RBP16.72■□□□□ 0.27
VPS33A-205ENST00000541169 LIX1LQ8IVB5 337 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 TUSC5Q8IXB3 177 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 C10orf53Q8N6V4 93 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 LIPHQ8WWY8 451 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 CLPTM1LQ96KA5 538 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 YY1AP1Q9H869 796 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 MPDZO75970 2070 aa16.72■□□□□ 0.27
VPS33A-205ENST00000541169 INTS1Q8N201 2190 aaKnown RBP16.71■□□□□ 0.27
VPS33A-205ENST00000541169 IGHV3-15A0A0B4J1V0 119 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 TCRBV5S2A0A599 114 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 OR6C65A6NJZ3 312 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 FAM90A27PA6NNH2 459 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 ZNF716A6NP11 495 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 A8MXE2 369 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 FFAR1O14842 300 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 PRSS23O95084 383 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 CGAP01215 116 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 BGLAPP02818 100 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 RAP2AP10114 183 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 ATP6V1B2P21281 511 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 VLDLRP98155 873 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 ZNF74Q16587 644 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 PLXDC2Q6UX71 529 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 WDR88Q6ZMY6 472 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 ZDHHC21Q8IVQ6 265 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 FAM86B1Q8N7N1 296 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 TMEM99Q8N816 258 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 RELL2Q8NC24 303 aaPredicted RBP16.71■□□□□ 0.27
VPS33A-205ENST00000541169 RNASE6Q93091 150 aaKnown RBP16.71■□□□□ 0.27
VPS33A-205ENST00000541169 TMEM45BQ96B21 275 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 DHRS1Q96LJ7 313 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 OXGR1Q96P68 337 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 USB1Q9BQ65 265 aaKnown RBP16.71■□□□□ 0.27
VPS33A-205ENST00000541169 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.71■□□□□ 0.27
VPS33A-205ENST00000541169 POMPQ9Y244 141 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 TMEM5Q9Y2B1 443 aa16.71■□□□□ 0.27
VPS33A-205ENST00000541169 PRSS44E7EML9 344 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 AKAP8O43823 692 aaKnown RBP16.7■□□□□ 0.26
VPS33A-205ENST00000541169 MRPL33O75394 65 aaKnown RBP16.7■□□□□ 0.26
VPS33A-205ENST00000541169 SMNDC1O75940 238 aaKnown RBP eCLIP16.7■□□□□ 0.26
VPS33A-205ENST00000541169 OR6A2O95222 327 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 RNF224P0DH78 156 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 NQO1P15559 274 aaKnown RBP16.7■□□□□ 0.26
VPS33A-205ENST00000541169 MAGEA2P43356 314 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 SORDQ00796 357 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 PMS2P3Q13401 168 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 TAF11Q15544 211 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 ZNF730Q6ZMV8 503 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 ASRGL1Q7L266 308 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 BTLAQ7Z6A9 289 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 NKAIN4Q8IVV8 208 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 CCDC103Q8IW40 242 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 LINC00471Q8N535 108 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 OR5J2Q8NH18 312 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 TMEM255BQ8WV15 326 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 SLC7A8Q9UHI5 535 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 ING1Q9UK53 422 aaPredicted RBP16.7■□□□□ 0.26
VPS33A-205ENST00000541169 NOSIPQ9Y314 301 aaKnown RBP16.7■□□□□ 0.26
VPS33A-205ENST00000541169 NOX1Q9Y5S8 564 aa16.7■□□□□ 0.26
VPS33A-205ENST00000541169 hCG_2039718K7EN88 272 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 M0R082 166 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 ZNF43P17038 809 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 GRPRP30550 384 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 IFNGR2P38484 337 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 YAP1P46937 504 aaKnown RBP16.69■□□□□ 0.26
VPS33A-205ENST00000541169 P2RY4P51582 365 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 SIRPAP78324 504 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 TFF3Q07654 80 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 PUDPQ08623 228 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 VWA1Q6PCB0 445 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 MBOAT2Q6ZWT7 520 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 PXKQ7Z7A4 578 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 GPAT4Q86UL3 456 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 ZNF100Q8IYN0 542 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 OR9K2Q8NGE7 335 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 ZNF417Q8TAU3 575 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 BPIFA2Q96DR5 249 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 SGTBQ96EQ0 304 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 ZNF587Q96SQ5 575 aaPredicted RBP16.69■□□□□ 0.26
VPS33A-205ENST00000541169 SEPHS2Q99611 448 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 RBM24Q9BX46 236 aaKnown RBP16.69■□□□□ 0.26
VPS33A-205ENST00000541169 HDHD5Q9BXW7 423 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 UCK2Q9BZX2 261 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 NDEL1Q9GZM8 345 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 MEPEQ9NQ76 525 aaPredicted RBP16.69■□□□□ 0.26
VPS33A-205ENST00000541169 MAN2C1Q9NTJ4 1040 aa16.69■□□□□ 0.26
VPS33A-205ENST00000541169 PLEKHB1Q9UF11 243 aaPredicted RBP16.69■□□□□ 0.26
VPS33A-205ENST00000541169 FLVCR1Q9Y5Y0 555 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms