RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 BSNQ9UPA5 3926 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 UBR5O95071 2799 aaPredicted RBP12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 CBR3O75828 277 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 NEURL1O76050 574 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 AHSA1O95433 338 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 PIPP12273 146 aaPredicted RBP12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 FKBP2P26885 142 aaKnown RBP12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 UQCRC1P31930 480 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 TMEM44Q2T9K0 475 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 LINC00303Q3SY05 128 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 SYT14P1Q58G82 188 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 MAMDC2Q7Z304 686 aaPredicted RBP12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 GPR141Q7Z602 305 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 SATL1Q86VE3 508 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 EXD3Q8N9H8 876 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF420Q8TAQ5 688 aaPredicted RBP12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 SGCDQ92629 289 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 GGHQ92820 318 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 MYDGFQ969H8 173 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 DDIT4LQ96D03 193 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 LRR1Q96L50 414 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 SIGLEC11Q96RL6 698 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 MYCBPQ99417 103 aaPredicted RBP12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 NDEL1Q9GZM8 345 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 CMC2Q9NRP2 79 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 DNAJC27Q9NZQ0 273 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 POLHQ9Y253 713 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 RPL36Q9Y3U8 105 aaKnown RBP12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 SPIN1Q9Y657 262 aaPredicted RBP12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 COMMD3-BMI1R4GMX3 469 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 PTPN13Q12923 2485 aa12.86□□□□□ -0.35
CYB561A3-216ENST00000540755 EFCAB10A6NFE3 127 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SNTNA6NMZ2 147 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 KDM4EB2RXH2 506 aaPredicted RBP12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 B8ZZF3 427 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 MCIDASD6RGH6 385 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 G3V3Y1 287 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 ARPC3O15145 178 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 PRODHO43272 600 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 RGS10O43665 173 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 PPP1R3DO95685 299 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 HIST1H2ABP04908 130 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 PEPDP12955 493 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 APEHP13798 732 aaKnown RBP12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 CNR1P21554 472 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 DPP4P27487 766 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SLC15A1P46059 708 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 DNASE1L1P49184 302 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 NUDT6P53370 316 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 MVKQ03426 396 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 CDC20Q12834 499 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SELENBP1Q13228 472 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 MFSD13AQ14CX5 517 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 GLYR1Q49A26 553 aaPredicted RBP12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 AGAP7PQ5VUJ5 663 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 C1QL3Q5VWW1 255 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 C3orf33Q6P1S2 294 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 ARHGAP11AQ6P4F7 1023 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 AHSA2Q719I0 299 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 HIST3H2AQ7L7L0 130 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 PRSS48Q7RTY5 328 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 NANOGNBQ7Z5D8 188 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SPARTQ8N0X7 666 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 GTPBP8Q8N3Z3 284 aaPredicted RBP12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SVOPQ8N4V2 548 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 LRRC75AQ8NAA5 344 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 HIST1H2ACQ93077 130 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF582Q96NG8 517 aaPredicted RBP12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 AGAP4Q96P64 663 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 RHNO1Q9BSD3 238 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 COPS4Q9BT78 406 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 OR11A1Q9GZK7 315 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 RNF32Q9H0A6 362 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 AMBNQ9NP70 447 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 NRIP3Q9NQ35 241 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 ERVK-18Q9QC07 812 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SLC6A5Q9Y345 797 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SHISA8B8ZZ34 492 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 FTCDNL1E5RQL4 147 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 J3QKU1 62 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 IDH3BO43837 385 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 EFNA2O43921 213 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 FZD7O75084 574 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 WDPCPO95876 746 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 CDK1P06493 297 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 PRKAR1AP10644 381 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF17P17021 662 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 HK1P19367 917 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SRD5A2P31213 254 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 AQP2P41181 271 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 MLLT10P55197 1068 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 PIGFQ07326 219 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 OR1C1Q15619 314 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SGCBQ16585 318 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 ALG10Q5BKT4 473 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 AADACL4Q5VUY2 407 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 NXNL2Q5VZ03 156 aa12.85□□□□□ -0.35
CYB561A3-216ENST00000540755 SPINK14Q6IE38 97 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms