RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 OR10H3O60404 316 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 E2F6O75461 281 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 TRAPPC6AO75865 159 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 IGHMP01871 453 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 IFI30P13284 250 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 EDN3P14138 238 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 PLA2G2AP14555 144 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 KLK2P20151 261 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 PRKACGP22612 351 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 GRPRP30550 384 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 SFTPDP35247 375 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 GPR4P46093 362 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 STARP49675 285 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 RAC3P60763 192 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 ZP4Q12836 540 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 COX10Q12887 443 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 MFSD13AQ14CX5 517 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 LPCAT4Q643R3 524 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 STK32CQ86UX6 486 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 CISD2Q8N5K1 135 aaKnown RBP9.44□□□□□ -0.9
VPS33A-204ENST00000540669 ICA1LQ8NDH6 482 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 OR13C2Q8NGS9 318 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 OR10D3Q8NH80 312 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 ZPLD1Q8TCW7 415 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 RNF128Q8TEB7 428 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 PITX2Q99697 317 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 RBM4BQ9BQ04 359 aaKnown RBP9.44□□□□□ -0.9
VPS33A-204ENST00000540669 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
VPS33A-204ENST00000540669 RBM4Q9BWF3 364 aaKnown RBP9.44□□□□□ -0.9
VPS33A-204ENST00000540669 SMURF2Q9HAU4 748 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 SEC14L4Q9UDX3 406 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 NPIPA1Q9UND3 350 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 ZNF175Q9Y473 711 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 CDH10Q9Y6N8 788 aa9.44□□□□□ -0.9
VPS33A-204ENST00000540669 NCOA6Q14686 2063 aaPredicted RBP9.44□□□□□ -0.9
VPS33A-204ENST00000540669 A0A1B0GTH9 108 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 M0R082 166 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 KPNA4O00629 521 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 GNGT2O14610 69 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 BCKDKO14874 412 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 TRAF3IP2O43734 574 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 RAMP1O60894 148 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 BAG2O95816 211 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 APEHP13798 732 aaKnown RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 FUT1P19526 365 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 GSTM3P21266 225 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 TCEA1P23193 301 aaKnown RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 IFNGR2P38484 337 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 RPS5P46782 204 aaKnown RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 PTDSS1P48651 473 aaKnown RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 HSF1Q00613 529 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 RBPJQ06330 500 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 PDK3Q15120 406 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 TMEM176BQ3YBM2 270 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 POMZP3Q6PJE2 187 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 THSD4Q6ZMP0 1018 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 FAM122BQ7Z309 247 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 MEX3DQ86XN8 651 aaKnown RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 LRRC17Q8N6Y2 441 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 OR5J2Q8NH18 312 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 ZNF417Q8TAU3 575 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 FAM57AQ8TBR7 257 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 GNPDA2Q8TDQ7 276 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 CPNE4Q96A23 557 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 EME1Q96AY2 570 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 SARAFQ96BY9 339 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 OR5B2Q96R09 309 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 ZNF587Q96SQ5 575 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 MBOAT4Q96T53 435 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 TUBA1CQ9BQE3 449 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 PLA2G12AQ9BZM1 189 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 SLC25A19Q9HC21 320 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 CHST11Q9NPF2 352 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 PAQR5Q9NXK6 330 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 TAS2R5Q9NYW4 299 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 B3GALT5Q9Y2C3 310 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 POFUT2Q9Y2G5 429 aa9.43□□□□□ -0.9
VPS33A-204ENST00000540669 USP9XQ93008 2570 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-204ENST00000540669 ALPK2Q86TB3 2170 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 EFCAB9A8MZ26 197 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 PLPP3O14495 311 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 BHLHE40O14503 412 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 TNFSF11O14788 317 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 EIF1BO60739 113 aaKnown RBP9.42□□□□□ -0.9
VPS33A-204ENST00000540669 CYTIPO60759 359 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 MITFO75030 526 aaPredicted RBP9.42□□□□□ -0.9
VPS33A-204ENST00000540669 TXNDC12O95881 172 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 CH25HO95992 272 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 OSMP13725 252 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 CCNA2P20248 432 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 IGFBP5P24593 272 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 EPHA2P29317 976 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 CSNK2A1P68400 391 aaPredicted RBP9.42□□□□□ -0.9
VPS33A-204ENST00000540669 SLC35A1P78382 337 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 TOMM20Q15388 145 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 C3AR1Q16581 482 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 RFX4Q33E94 735 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 ACSF3Q4G176 576 aaPredicted RBP9.42□□□□□ -0.9
VPS33A-204ENST00000540669 RTL6Q6ICC9 239 aa9.42□□□□□ -0.9
VPS33A-204ENST00000540669 RPL13AP3Q6NVV1 102 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms