RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SRA1Q9HD15 236 aaKnown RBP10.28□□□□□ -0.76
PBX1-212ENST00000540236 NME7Q9Y5B8 376 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 PTPRFP10586 1907 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 NAP1L6A6NFF2 107 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 LILRB5O75023 590 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 FGF2P09038 288 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 IFNGR1P15260 489 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 BPIFB2Q8N4F0 458 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 OR56B1Q8NGI3 324 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 PACRGQ96M98 296 aaPredicted RBP10.28□□□□□ -0.76
PBX1-212ENST00000540236 OCSTAMPQ9BR26 566 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 CDCA7Q9BWT1 371 aaPredicted RBP10.28□□□□□ -0.76
PBX1-212ENST00000540236 RIMS4Q9H426 269 aaPredicted RBP10.28□□□□□ -0.76
PBX1-212ENST00000540236 RNF181Q9P0P0 153 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 CAMK2AQ9UQM7 478 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 AMDHD2Q9Y303 409 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 MEMO1Q9Y316 297 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 DMRT1Q9Y5R6 373 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 A0A1B0GUH1 482 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 METTL12A8MUP2 240 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 PHYHO14832 338 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 C22orf31O95567 290 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 IGFBP6P24592 240 aaPredicted RBP10.28□□□□□ -0.76
PBX1-212ENST00000540236 ST3GAL3Q11203 375 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 CHST11Q9NPF2 352 aa10.28□□□□□ -0.76
PBX1-212ENST00000540236 YY2O15391 372 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 ADAMTS4O75173 837 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 CATP04040 527 aaKnown RBP10.27□□□□□ -0.76
PBX1-212ENST00000540236 THBS1P07996 1170 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 RAB5AP20339 215 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 OR3A2P47893 321 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 MLIPQ5VWP3 458 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 LRRC52Q8N7C0 313 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 ZNF610Q8N9Z0 462 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 POMGNT2Q8NAT1 580 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 C16orf78Q8WTQ4 265 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 SMARCD2Q92925 531 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 MOAP1Q96BY2 351 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 LAT2Q9GZY6 243 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 DUSP22Q9NRW4 184 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 ZNF337Q9Y3M9 751 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 KIAA1551Q9HCM1 1747 aa10.27□□□□□ -0.76
PBX1-212ENST00000540236 DICER1Q9UPY3 1922 aaKnown RBP10.27□□□□□ -0.76
PBX1-212ENST00000540236 CSF1P09603 554 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 LAMP2P13473 410 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 PI3P19957 117 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 TBXA2RP21731 343 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 OMGP23515 440 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 ZNF763Q0D2J5 394 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 GXYLT1Q4G148 440 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 ELFN2Q5R3F8 820 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 ZNF101Q8IZC7 436 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 TEX26Q8N6G2 289 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 ARRDC4Q8NCT1 418 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 OR4K17Q8NGC6 315 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 TMEM255BQ8WV15 326 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 MARVELD3Q96A59 401 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 RAB7BQ96AH8 199 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 OR11A1Q9GZK7 315 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 SNAPC5O75971 98 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 CD3DP04234 171 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 PRSS3P35030 304 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 SNRPGP62308 76 aaKnown RBP10.27□□□□□ -0.77
PBX1-212ENST00000540236 LSM11P83369 360 aaKnown RBP eCLIP10.27□□□□□ -0.77
PBX1-212ENST00000540236 EIF5AL1Q6IS14 154 aaKnown RBP10.27□□□□□ -0.77
PBX1-212ENST00000540236 PXKQ7Z7A4 578 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 OR6N2Q8NGY6 317 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 LRFN5Q96NI6 719 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 CMKLR1Q99788 373 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 V9GY05 133 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 USP54Q70EL1 1684 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 NFATC1O95644 943 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 NDUFV2P19404 249 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 XCR1P46094 333 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 P2RX1P51575 399 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 CXADRP78310 365 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 TAF10Q12962 218 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 ECH1Q13011 328 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 VEZF1Q14119 521 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 ERASQ7Z444 233 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 GID4Q8IVV7 300 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 SLC30A7Q8NEW0 376 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 ZNF596Q8TC21 504 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 MRPL38Q96DV4 380 aaKnown RBP10.27□□□□□ -0.77
PBX1-212ENST00000540236 ZC3HAV1LQ96H79 300 aaKnown RBP10.27□□□□□ -0.77
PBX1-212ENST00000540236 ARHGAP9Q9BRR9 750 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 ST6GALNAC5Q9BVH7 336 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 HEXA-AS1Q9H8Q6 139 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 B4E171 279 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 MCIDASD6RGH6 385 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 TAS2R43P59537 309 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 NKAIN1Q4KMZ8 207 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 GAREM2Q75VX8 874 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 SMOC1Q9H4F8 434 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 IL20Q9NYY1 176 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
PBX1-212ENST00000540236 MAMSTRQ6ZN01 415 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 C15orf54Q8N8G6 183 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 OR4C16Q8NGL9 310 aa10.26□□□□□ -0.77
PBX1-212ENST00000540236 EXTL1Q92935 676 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms