RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ULBP3Q9BZM4 244 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 KCNK15Q9H427 330 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 PRTFDC1Q9NRG1 225 aa12.86□□□□□ -0.35
UBE3B-210ENST00000539599 ZFPL1O95159 310 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 HPXP02790 462 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 HOXC4P09017 264 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-210ENST00000539599 MST1P26927 711 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 PON3Q15166 354 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 ST3GAL2Q16842 350 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 LINC00114Q6XXX2 140 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 WDR89Q96FK6 387 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-210ENST00000539599 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 TRIM2Q9C040 744 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 TWSG1Q9GZX9 223 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 OR10A5Q9H207 317 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 MKKSQ9NPJ1 570 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-210ENST00000539599 KLK11Q9UBX7 282 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 COL6A3P12111 3177 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 ABCA7Q8IZY2 2146 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 DOK2O60496 412 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 GAAP10253 952 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 GBX2P52951 348 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-210ENST00000539599 C1QL3Q5VWW1 255 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 ARMC6Q6NXE6 501 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 C9orf62Q8N4C0 152 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 PHOSPHO1Q8TCT1 267 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-210ENST00000539599 DGAT2Q96PD7 388 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 LMF2Q9BU23 707 aaKnown RBP12.85□□□□□ -0.35
UBE3B-210ENST00000539599 LRRC61Q9BV99 259 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 SEMA4CQ9C0C4 833 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-210ENST00000539599 GHITMQ9H3K2 345 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 SERTAD3Q9UJW9 196 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 ICAM5Q9UMF0 924 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 THADAQ6YHU6 1953 aa12.85□□□□□ -0.35
UBE3B-210ENST00000539599 CABIN1Q9Y6J0 2220 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 SERINC4A6NH21 518 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 NOTOA8MTQ0 251 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 H0YC42 278 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 TNFRSF10CO14798 259 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 SDC3O75056 442 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 GPR3P46089 330 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 OR1D4P47884 311 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 LTBQ06643 244 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 HSD17B12Q53GQ0 312 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 PYHIN1Q6K0P9 492 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 MED25Q71SY5 747 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 OR51A4Q8NGJ6 313 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 GIMAP1Q8WWP7 306 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 ZFP64Q9NPA5 681 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 PNO1Q9NRX1 252 aaKnown RBP12.84□□□□□ -0.35
UBE3B-210ENST00000539599 C14orf105Q9NVL8 296 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 POMT2Q9UKY4 750 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 MGAT4AQ9UM21 535 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 RCE1Q9Y256 329 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 A0A087WUJ7 227 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 KHNYNO15037 678 aaKnown RBP12.84□□□□□ -0.35
UBE3B-210ENST00000539599 GALP22466 123 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 ZCCHC12Q6PEW1 402 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 LSMEM1Q8N8F7 131 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 ZSCAN1Q8NBB4 408 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-210ENST00000539599 TSLPQ969D9 159 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 MRPL38Q96DV4 380 aaKnown RBP12.84□□□□□ -0.35
UBE3B-210ENST00000539599 TGM7Q96PF1 710 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 Q9N2J8 555 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 INPP5EQ9NRR6 644 aa12.84□□□□□ -0.35
UBE3B-210ENST00000539599 SPTY2D1-AS1A0A0U1RR47 76 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 SHISA7A6NL88 538 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 NPIPB9F8W1W9 429 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 OGG1O15527 345 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 ALX3O95076 343 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 PLGP00747 810 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-210ENST00000539599 MYF5P13349 255 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 SRMP19623 302 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 GDNFP39905 211 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 TNK1Q13470 666 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 TOMM34Q15785 309 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-210ENST00000539599 CDONQ4KMG0 1287 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 OR8H1Q8NGG4 311 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 KTI12Q96EK9 354 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-210ENST00000539599 DPAGT1Q9H3H5 408 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 SEMA6CQ9H3T2 930 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-210ENST00000539599 HAO2Q9NYQ3 351 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 TEKT2Q9UIF3 430 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 UNC13CQ8NB66 2214 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 CNTRLQ7Z7A1 2325 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 TRABD2BA6NFA1 517 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 AK1P00568 194 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 OR2T7P0C7T2 308 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 RNH1P13489 461 aaKnown RBP12.83□□□□□ -0.36
UBE3B-210ENST00000539599 DIO1P49895 249 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 EFNA3P52797 238 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 TAS2R43P59537 309 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 ACTC1P68032 377 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms