RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 UGT1A4P22310 534 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CA4P22748 312 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 AADACP22760 399 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RBMS1P29558 406 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 PDHA2P29803 388 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CCKBRP32239 447 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RPL13AP40429 203 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CDKN2CP42773 168 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SLC1A2P43004 574 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CBX5P45973 191 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 TGM4P49221 684 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 MRPL19P49406 292 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 OR2B6P58173 313 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SEC61BP60468 96 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ZP1P60852 638 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RPS18P62269 152 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 KCNJ2P63252 427 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CDR2Q01850 454 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 GUCY2DQ02846 1103 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CHRNB3Q05901 458 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 IFFO1Q0D2I5 559 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ZP4Q12836 540 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 STX5Q13190 355 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 KLF5Q13887 457 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 GPR18Q14330 331 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 OPCMLQ14982 345 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ATXN7L3Q14CW9 347 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 INPP5JQ15735 1006 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CHI3L2Q15782 390 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 TMEM35AQ53FP2 167 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 C5orf47Q569G3 176 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 BEND3Q5T5X7 828 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 PLPP4Q5VZY2 271 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RUSC1-AS1Q66K80 236 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 LEG1Q6P5S2 330 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 BHLHB9Q6PI77 547 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 PARM1Q6UWI2 310 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 C17orf107Q6ZR85 190 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SLC16A12Q6ZSM3 486 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 UTS2BQ765I0 119 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 CACUL1Q86Y37 369 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 APRG1Q8IVJ8 170 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 MAP7D3Q8IWC1 876 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ZC3H3Q8IXZ2 948 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF34Q8IZ26 560 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SYS1Q8N2H4 156 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 MARVELD2Q8N4S9 558 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 INO80EQ8NBZ0 244 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 NECAP1Q8NC96 275 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 OR5R1Q8NH85 324 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 FAM110BQ8TC76 370 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF473Q8WTR7 871 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SLC38A5Q8WUX1 472 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SMARCD2Q92925 531 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 OTUB2Q96DC9 234 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 NUS1Q96E22 293 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 MED30Q96HR3 178 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 C10orf90Q96M02 699 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 WDR77Q9BQA1 342 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 NAT9Q9BTE0 207 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 POLDIP3Q9BY77 421 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 PARD6GQ9BYG4 376 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SRRQ9GZT4 340 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RACGAP1Q9H0H5 632 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 KRCC1Q9NPI7 259 aaPredicted RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 INPP5EQ9NRR6 644 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ZFP57Q9NU63 452 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 IMP3Q9NV31 184 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 GPATCH2LQ9NWQ4 482 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 C2orf42Q9NWW7 574 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 GPR83Q9NYM4 423 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 STMN3Q9NZ72 180 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 IL36AQ9UHA7 158 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 MRM2Q9UI43 246 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 ANAPC7Q9UJX3 599 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 SAMHD1Q9Y3Z3 626 aaKnown RBP3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 FKBP7Q9Y680 259 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 MTCH2Q9Y6C9 303 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 FRMPD4Q14CM0 1322 aa3.34□□□□□ -1.87
AC055720.1-201ENST00000539552 RPAP1Q9BWH6 1393 aaPredicted RBP3.34□□□□□ -1.88
AC055720.1-201ENST00000539552 KAT6AQ92794 2004 aa3.34□□□□□ -1.88
AC055720.1-201ENST00000539552 EPPK1P58107 5090 aaKnown RBP3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 ARHGEF17Q96PE2 2063 aaPredicted RBP3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 TRBV5-3A0A0A0MS03 114 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 A0A1W2PRD5 423 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 CLEC18AA5D8T8 446 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 GOLGA8JA6NMD2 632 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 SRRM4A7MD48 611 aaKnown RBP3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 GOLGA8KD6RF30 607 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 PRAMEF26H0Y7S4 382 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 H3BMH7 237 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 M0R3G1 203 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 IMPA2O14732 288 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 LIN7AO14910 233 aaPredicted RBP3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 ZBTB5O15062 677 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 MID1O15344 667 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 AIREO43918 545 aa3.33□□□□□ -1.88
AC055720.1-201ENST00000539552 HUS1O60921 280 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms