RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CREB3L2Q70SY1 520 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 CCDC80Q76M96 950 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 RBM45Q8IUH3 476 aaKnown RBP13.8□□□□□ -0.2
CIT-210ENST00000539413 OR6T1Q8NGN1 323 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 VANGL1Q8TAA9 524 aaPredicted RBP13.8□□□□□ -0.2
CIT-210ENST00000539413 SLC26A7Q8TE54 656 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 RCN3Q96D15 328 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 ZNF583Q96ND8 569 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 GID8Q9NWU2 228 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 TAS2R16Q9NYV7 291 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 SELENONQ9NZV5 590 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 UPB1Q9UBR1 384 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 RASD1Q9Y272 281 aa13.8□□□□□ -0.2
CIT-210ENST00000539413 TRAV36DV7A0A075B6V5 113 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 FMO6PO60774 539 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 FZD7O75084 574 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 VAMP5O95183 116 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 CBLP22681 906 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 SEC24CP53992 1094 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 GABRA6Q16445 453 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 ENTPD8Q5MY95 495 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 FAM69AQ5T7M9 428 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 C5orf46Q6UWT4 87 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 EPHX4Q8IUS5 362 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 ELAC2Q9BQ52 826 aaKnown RBP13.79□□□□□ -0.2
CIT-210ENST00000539413 SLCO5A1Q9H2Y9 848 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 ESRP2Q9H6T0 727 aaKnown RBP13.79□□□□□ -0.2
CIT-210ENST00000539413 NGBQ9NPG2 151 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 BEX4Q9NWD9 120 aaPredicted RBP13.79□□□□□ -0.2
CIT-210ENST00000539413 CELSR1Q9NYQ6 3014 aa13.79□□□□□ -0.2
CIT-210ENST00000539413 A0A1W2PR80 420 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 DPRXA6NFQ7 191 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
CIT-210ENST00000539413 M0R082 166 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 OR2T1O43869 369 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 CCDC22O60826 627 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 CD3EP07766 207 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 COX4I1P13073 169 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 GRPRP30550 384 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 SELENOPP49908 381 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 LTBQ06643 244 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 LGALS3BPQ08380 585 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 SWT1Q5T5J6 900 aaKnown RBP13.78□□□□□ -0.2
CIT-210ENST00000539413 ZNF613Q6PF04 617 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 C20orf204Q6ZNR8 217 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 SPATA21Q7Z572 469 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 TSPYL5Q86VY4 417 aaPredicted RBP13.78□□□□□ -0.2
CIT-210ENST00000539413 P2RY8Q86VZ1 359 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 OR52N5Q8NH56 324 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 LILRB1Q8NHL6 650 aaPredicted RBP13.78□□□□□ -0.2
CIT-210ENST00000539413 RP9Q8TA86 221 aaKnown RBP13.78□□□□□ -0.2
CIT-210ENST00000539413 ZNF417Q8TAU3 575 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 PIGTQ969N2 578 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 MUCL1Q96DR8 90 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 MUS81Q96NY9 551 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 ZNF587Q96SQ5 575 aaPredicted RBP13.78□□□□□ -0.2
CIT-210ENST00000539413 CCL19Q99731 98 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 NPAP1Q9NZP6 1156 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 B3GAT1Q9P2W7 334 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 RAI1Q7Z5J4 1906 aaPredicted RBP13.78□□□□□ -0.2
CIT-210ENST00000539413 FREM1Q5H8C1 2179 aa13.78□□□□□ -0.2
CIT-210ENST00000539413 AIM2O14862 343 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 CLOCKO15516 846 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 LYPD3O95274 346 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 BGLAPP02818 100 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 THY1P04216 161 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 TNFRSF1BP20333 461 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 ADAM8P78325 824 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 BSPH1Q075Z2 132 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 VEZF1Q14119 521 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 NIPAL3Q6P499 406 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 ERICH5Q6P6B1 374 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 LINC00114Q6XXX2 140 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 WDR88Q6ZMY6 472 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 TREML1Q86YW5 311 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 TGIF2LYQ8IUE0 185 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 OR6S1Q8NH40 331 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 ADAMTS16Q8TE57 1224 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 RASSF5Q8WWW0 418 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
CIT-210ENST00000539413 NEUROG1Q92886 237 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 OXGR1Q96P68 337 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 MOGAT1Q96PD6 335 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 EPYCQ99645 322 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 PIP5K1AQ99755 562 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 TMEM43Q9BTV4 400 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 AMBRA1Q9C0C7 1298 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 B3GALT5Q9Y2C3 310 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 SLC25A15Q9Y619 301 aa13.77□□□□□ -0.21
CIT-210ENST00000539413 FAM220BPB1ANY3 271 aa13.76□□□□□ -0.21
CIT-210ENST00000539413 LRRN3E7EW58 273 aa13.76□□□□□ -0.21
CIT-210ENST00000539413 HS3ST1O14792 307 aa13.76□□□□□ -0.21
CIT-210ENST00000539413 CHP2O43745 196 aa13.76□□□□□ -0.21
CIT-210ENST00000539413 ZNF43P17038 809 aa13.76□□□□□ -0.21
CIT-210ENST00000539413 MPGP29372 298 aa13.76□□□□□ -0.21
CIT-210ENST00000539413 GYS2P54840 703 aa13.76□□□□□ -0.21
CIT-210ENST00000539413 CLDN17P56750 224 aa13.76□□□□□ -0.21
CIT-210ENST00000539413 OR7E24Q6IFN5 339 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms