RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 KDM4EB2RXH2 506 aaPredicted RBP21.03■□□□□ 0.96
TMEM260-202ENST00000538838 SMAD9O15198 467 aaKnown RBP21.03■□□□□ 0.96
TMEM260-202ENST00000538838 DNPH1O43598 174 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 ANXA8P13928 327 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 NUP107P57740 925 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 PPP2R2BQ00005 443 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 PON3Q15166 354 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 SOWAHCQ53LP3 525 aaPredicted RBP21.03■□□□□ 0.96
TMEM260-202ENST00000538838 OAFQ86UD1 273 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 TMEM99Q8N816 258 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 OR5J2Q8NH18 312 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 PAQR5Q9NXK6 330 aaPredicted RBP21.03■□□□□ 0.96
TMEM260-202ENST00000538838 CORINQ9Y5Q5 1042 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 ARHGAP21Q5T5U3 1957 aa21.03■□□□□ 0.96
TMEM260-202ENST00000538838 UNC119BA6NIH7 251 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 SLC19A2O60779 497 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 ENPP1P22413 925 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 RBPJQ06330 500 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 FHL1Q13642 323 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 PAQR6Q6TCH4 344 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 OR51A7Q8NH64 312 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 ZPLD1Q8TCW7 415 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 NRG4Q8WWG1 115 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 ROBO4Q8WZ75 1007 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 ZHX1-C8orf76Q96EF9 292 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 SLC29A1Q99808 456 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 ZNF556Q9HAH1 456 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 CHST11Q9NPF2 352 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 MRPL39Q9NYK5 338 aaKnown RBP21.02■□□□□ 0.96
TMEM260-202ENST00000538838 ZNF835Q9Y2P0 537 aa21.02■□□□□ 0.96
TMEM260-202ENST00000538838 CHD6Q8TD26 2715 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 RAMP1O60894 148 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 C1QL1O75973 258 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 HIST1H2ABP04908 130 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 SLC9A3P48764 834 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 P2RY4P51582 365 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 AGFG1P52594 562 aaKnown RBP21.01■□□□□ 0.95
TMEM260-202ENST00000538838 PMS2P3Q13401 168 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 DAG1Q14118 895 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 ACSF3Q4G176 576 aaPredicted RBP21.01■□□□□ 0.95
TMEM260-202ENST00000538838 OGFRL1Q5TC84 451 aaPredicted RBP21.01■□□□□ 0.95
TMEM260-202ENST00000538838 KLHL17Q6TDP4 642 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 ZBTB49Q6ZSB9 765 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 HIST3H2AQ7L7L0 130 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 CCDC103Q8IW40 242 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 SCAIQ8N9R8 606 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 FNDC9Q8TBE3 224 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 HIST1H2ACQ93077 130 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 TRIB1Q96RU8 372 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 OSBPL10Q9BXB5 764 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 UCK2Q9BZX2 261 aa21.01■□□□□ 0.95
TMEM260-202ENST00000538838 TMEFF2Q9UIK5 374 aaPredicted RBP21.01■□□□□ 0.95
TMEM260-202ENST00000538838 RALYQ9UKM9 306 aaKnown RBP21.01■□□□□ 0.95
TMEM260-202ENST00000538838 MCTS1Q9ULC4 181 aaKnown RBP21.01■□□□□ 0.95
TMEM260-202ENST00000538838 AQP7P3A6NL99 342 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 EIF1BO60739 113 aaKnown RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 MITFO75030 526 aaPredicted RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 SYNGR4O95473 234 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 RPS4XP62701 263 aaKnown RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 H3F3AP84243 136 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 IL1RL1Q01638 556 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 KDM4DQ6B0I6 523 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 H1FNTQ75WM6 255 aaPredicted RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 ADGRE4PQ86SQ3 457 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 ZNF843Q8N446 348 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 FANK1Q8TC84 345 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 MAGEE2Q8TD90 523 aaPredicted RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 TNFRSF13CQ96RJ3 184 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 RBM4BQ9BQ04 359 aaKnown RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 RBM4Q9BWF3 364 aaKnown RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 MCCC2Q9HCC0 563 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 KRT84Q9NSB2 600 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 CLCF1Q9UBD9 225 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 SIGLEC7Q9Y286 467 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 FIGNL2A6NMB9 653 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 AHRRA9YTQ3 701 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 BLOC1S5-TXNDC5H3BN57 136 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 PLPP3O14495 311 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 PRRG2O14669 202 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 SOX14O95416 240 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 ALPLP05186 524 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 IGFBP5P24593 272 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 UQCRC1P31930 480 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 FXYD6P3P58550 94 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 TLE1Q04724 770 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 ZBED5Q49AG3 693 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 C3P1Q6ZMU1 363 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 ZNF620Q6ZNG0 422 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 GALNT5Q7Z7M9 940 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 KIF18BQ86Y91 864 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 KDM8Q8N371 416 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 MOSPD2Q8NHP6 518 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 NAA11Q9BSU3 229 aaPredicted RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 EGLN3Q9H6Z9 239 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 PAPOLBQ9NRJ5 636 aaKnown RBP21■□□□□ 0.95
TMEM260-202ENST00000538838 KLHL13Q9P2N7 655 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 TINAGQ9UJW2 476 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 B3GALT5Q9Y2C3 310 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 HIF3AQ9Y2N7 669 aa21■□□□□ 0.95
TMEM260-202ENST00000538838 SLC22A20A6NK97 555 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms