RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 EPHX4Q8IUS5 362 aa14.57□□□□□ -0.08
PTPN6-210ENST00000538318 CLIP4Q8N3C7 705 aa14.57□□□□□ -0.08
PTPN6-210ENST00000538318 FBXO17Q96EF6 278 aa14.57□□□□□ -0.08
PTPN6-210ENST00000538318 ZNF317Q96PQ6 595 aaPredicted RBP14.57□□□□□ -0.08
PTPN6-210ENST00000538318 SLC38A2Q96QD8 506 aa14.57□□□□□ -0.08
PTPN6-210ENST00000538318 BEX2Q9BXY8 128 aa14.57□□□□□ -0.08
PTPN6-210ENST00000538318 TPT1P8Q9HAU6 139 aa14.57□□□□□ -0.08
PTPN6-210ENST00000538318 ZNF443Q9Y2A4 671 aaPredicted RBP14.57□□□□□ -0.08
PTPN6-210ENST00000538318 A0A0G2JPF8 293 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 OR6C65A6NJZ3 312 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 TMEM229AB2RXF0 380 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 HNRNPCL2B2RXH8 293 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 HNRNPCL3B7ZW38 293 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 ZNF587BE7ETH6 402 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 HNRNPCL1O60812 293 aaKnown RBP14.56□□□□□ -0.08
PTPN6-210ENST00000538318 KRT33AO76009 404 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 HNRNPCL4P0DMR1 293 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 SELENOPP49908 381 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 WDR4P57081 412 aaKnown RBP14.56□□□□□ -0.08
PTPN6-210ENST00000538318 DSTNP60981 165 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 LGALS3BPQ08380 585 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 LARS2Q15031 903 aaKnown RBP14.56□□□□□ -0.08
PTPN6-210ENST00000538318 CROCCP2Q86T23 111 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 MAGEE2Q8TD90 523 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-210ENST00000538318 STK35Q8TDR2 534 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 BCL2L2Q92843 193 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-210ENST00000538318 C3orf49Q96BT1 292 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 MAELQ96JY0 434 aaKnown RBP14.56□□□□□ -0.08
PTPN6-210ENST00000538318 SORCS2Q96PQ0 1159 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 KATNB1Q9BVA0 655 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 SPATA9Q9BWV2 254 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 THUMPD1Q9NXG2 353 aaKnown RBP14.56□□□□□ -0.08
PTPN6-210ENST00000538318 CRNNQ9UBG3 495 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-210ENST00000538318 LPAR3Q9UBY5 353 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 ZNF232Q9UNY5 417 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 RASD1Q9Y272 281 aa14.56□□□□□ -0.08
PTPN6-210ENST00000538318 ARPC4-TTLL3A0A0A6YYG9 625 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 FTCDNL1E5RQL4 147 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 SLCO1B7G3V0H7 640 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 NDUFS8O00217 210 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 PHF1O43189 567 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-210ENST00000538318 UPK3AO75631 287 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 LGI1O95970 557 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 CRYAAP02489 173 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 KITP10721 976 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 ZNF16P17020 682 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-210ENST00000538318 NCF2P19878 526 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-210ENST00000538318 SERPINF1P36955 418 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 PDLIM4P50479 330 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 SNRPD2P62316 118 aaKnown RBP14.55□□□□□ -0.08
PTPN6-210ENST00000538318 C3orf36Q3SXR2 165 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 RPS26P11Q5JNZ5 115 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-210ENST00000538318 PRAMEF8Q5VWM4 474 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 PRAMEF7Q5VXH5 474 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 NXNQ6DKJ4 435 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 NIPAL3Q6P499 406 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 ANKRD16Q6P6B7 361 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 MSANTD1Q6ZTZ1 278 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 LINGO2Q7L985 606 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 SERPINA11Q86U17 422 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 ANKRD42Q8N9B4 389 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 MFSD8Q8NHS3 518 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 ZBTB9Q96C00 473 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 TMEM19Q96HH6 336 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 ALKBH3Q96Q83 286 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-210ENST00000538318 KCNS3Q9BQ31 491 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 LINC00470Q9BZP3 86 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 SHARPINQ9H0F6 387 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 ARMC7Q9H6L4 198 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 RMND5AQ9H871 391 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 SDR39U1Q9NRG7 319 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-210ENST00000538318 CA10Q9NS85 328 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 ZIM2Q9NZV7 527 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 IFT52Q9Y366 437 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 FKBP7Q9Y680 259 aa14.55□□□□□ -0.08
PTPN6-210ENST00000538318 LMX1BO60663 402 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 PDE5AO76074 875 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 ANP32DO95626 131 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 HOXB1P14653 301 aaPredicted RBP14.54□□□□□ -0.08
PTPN6-210ENST00000538318 NR4A2P43354 598 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 GZMKP49863 264 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 UBE2NP61088 152 aaKnown RBP14.54□□□□□ -0.08
PTPN6-210ENST00000538318 EGR4Q05215 589 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 ADIPOQQ15848 244 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 GTDC1Q4AE62 458 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 SLC9B1Q4ZJI4 515 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 FAM169BQ8N8A8 192 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 ANKK1Q8NFD2 765 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 SLC35B4Q969S0 331 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 VPS33AQ96AX1 596 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 ITCHQ96J02 903 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 PIMREGQ9BSJ6 248 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 PTDSS2Q9BVG9 487 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 NELFAQ9H3P2 528 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 MOV10Q9HCE1 1003 aaKnown RBP14.54□□□□□ -0.08
PTPN6-210ENST00000538318 BCL2L10Q9HD36 194 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 MYOZ1Q9NP98 299 aaPredicted RBP14.54□□□□□ -0.08
PTPN6-210ENST00000538318 RAB21Q9UL25 225 aa14.54□□□□□ -0.08
PTPN6-210ENST00000538318 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.53□□□□□ -0.08
PTPN6-210ENST00000538318 LOC390937A0A1W2PQ73 354 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms