RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 RPS6KA6Q9UK32 745 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 SAMD4AQ9UPU9 718 aaKnown RBP11.62□□□□□ -0.55
CHFR-216ENST00000538235 FLVCR1Q9Y5Y0 555 aa11.62□□□□□ -0.55
CHFR-216ENST00000538235 ANKHD1Q8IWZ3 2542 aaKnown RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 SETXQ7Z333 2677 aaKnown RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 A0A087WUU8 490 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 EEF1E1-BLOC1S5C9J1V9 151 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 MS4A18H0YCH9 400 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 EEF1E1O43324 174 aaKnown RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 DNPH1O43598 174 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 TRAF3IP2O43734 574 aaPredicted RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 IL18BPO95998 194 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 FCGR2AP12318 317 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 ZNF26P17031 533 aaPredicted RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 MAKP20794 623 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 OPRM1P35372 400 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 CSNK2A1P68400 391 aaPredicted RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 SLC35A1P78382 337 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 RASGEF1BQ0VAM2 473 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 PPP1R8Q12972 351 aaKnown RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 MS4A18Q3C1V0 323 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 PDSS1Q5T2R2 415 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 FAM69AQ5T7M9 428 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 CHMP1BQ7LBR1 199 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 MAMDC2Q7Z304 686 aaPredicted RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 EPHX4Q8IUS5 362 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 SLC7A13Q8TCU3 470 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 CA5BP1Q8WTZ4 195 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 LZICQ8WZA0 190 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 ZFP3Q96NJ6 502 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 SEPHS2Q99611 448 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 GPA33Q99795 319 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 NMNAT1Q9HAN9 279 aaPredicted RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 PAQR5Q9NXK6 330 aaPredicted RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 GALNT8Q9NY28 637 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 COQ3Q9NZJ6 369 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 ZNF629Q9UEG4 869 aaPredicted RBP11.61□□□□□ -0.55
CHFR-216ENST00000538235 TESMINQ9Y4I5 508 aa11.61□□□□□ -0.55
CHFR-216ENST00000538235 A8MXE2 369 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 PRSS44E7EML9 344 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 CDC42EP2O14613 210 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 CH25HO95992 272 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 GPIP06744 558 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 LIMS1P48059 325 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 ASCL1P50553 236 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 MAP2K6P52564 334 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 GTF2A1P52655 376 aaPredicted RBP11.6□□□□□ -0.55
CHFR-216ENST00000538235 CCNIQ14094 377 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 TSC22D1Q15714 1073 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 SLC25A35Q3KQZ1 300 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 FBXL19-AS1Q494R0 122 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 ZNF787Q6DD87 383 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 OR2A2Q6IF42 318 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 LINGO2Q7L985 606 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 DHFR2Q86XF0 187 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 NRMQ8IXM6 262 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 OR6K3Q8NGY3 331 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 TMEM239Q8WW34 195 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 POLR2J2Q9GZM3 115 aaKnown RBP11.6□□□□□ -0.55
CHFR-216ENST00000538235 POLR2J3Q9H1A7 115 aaKnown RBP11.6□□□□□ -0.55
CHFR-216ENST00000538235 CHST11Q9NPF2 352 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 STOML1Q9UBI4 398 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 UNC79Q9P2D8 2635 aa11.6□□□□□ -0.55
CHFR-216ENST00000538235 TCRBV3S1A0A5B6 114 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 DVL2O14641 736 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 SMNDC1O75940 238 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHFR-216ENST00000538235 IGHV3-9P01782 118 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 CRHP06850 196 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 TSPAN19P0C672 248 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 ASAH2BP0C7U1 165 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 THRBP10828 461 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 CD8BP10966 210 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 FXYD6P3P58550 94 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 FAM27E3Q08E93 113 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 RNPS1Q15287 305 aaKnown RBP11.59□□□□□ -0.55
CHFR-216ENST00000538235 SF3B4Q15427 424 aaKnown RBP eCLIP11.59□□□□□ -0.554e-6■■■■■ 27.2
CHFR-216ENST00000538235 PODNL1Q6PEZ8 512 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 TMEM179BQ7Z7N9 219 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 ZDHHC21Q8IVQ6 265 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 OR4C15Q8NGM1 316 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 OR6S1Q8NH40 331 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 MOSPD2Q8NHP6 518 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 PIGXQ8TBF5 258 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 CANT1Q8WVQ1 401 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 MUC13Q9H3R2 512 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 IL1RAPQ9NPH3 570 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 TAS2R5Q9NYW4 299 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 KLF2Q9Y5W3 355 aaPredicted RBP11.59□□□□□ -0.55
CHFR-216ENST00000538235 CENPEQ02224 2701 aa11.59□□□□□ -0.55
CHFR-216ENST00000538235 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.55
CHFR-216ENST00000538235 ZNF724A8MTY0 619 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 EBAG9O00559 213 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 PLPP3O14495 311 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 KLF4O43474 513 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 OR7A10O76100 309 aa11.58□□□□□ -0.56
CHFR-216ENST00000538235 FABP3P05413 133 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms