RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 FCRL4Q96PJ5 515 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 SLC35A5Q9BS91 424 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 ZNF426Q9BUY5 554 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 ATG5Q9H1Y0 275 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 ISG20L2Q9H9L3 353 aaKnown RBP7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 APMAPQ9HDC9 416 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 KIAA1217Q5T5P2 1943 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 SERTM1A2A2V5 107 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 A8MXE2 369 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 LOC285556D6RIA3 1793 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 NPC1O15118 1278 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 VNN2O95498 520 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 LRG1P02750 347 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 MT-ND5P03915 603 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 CHRM4P08173 479 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 PIRTP0C851 137 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 ARAFP10398 606 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 COL11A1P12107 1806 aaPredicted RBP7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 MMP11P24347 488 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 PPP2R1BP30154 601 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 ZNF84P51523 738 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 SRSF5Q13243 272 aaKnown RBP7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 PNLIPRP3Q17RR3 467 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 ISXQ2M1V0 245 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 LY6G6FQ5SQ64 297 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 TMEM69Q5SWH9 247 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 FAM182BQ5T319 152 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 REEP3Q6NUK4 255 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 ARHGAP11AQ6P4F7 1023 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 HEPN1Q6WQI6 88 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 CAMKMTQ7Z624 323 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 TMPRSS11BQ86T26 416 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 IQCHQ86VS3 1027 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 HIST3H2BBQ8N257 126 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 CPEB3Q8NE35 698 aaKnown RBP7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 ARRDC2Q8TBH0 407 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 NEK7Q8TDX7 302 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 DUSP19Q8WTR2 217 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 TMED6Q8WW62 240 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 FOXRED1Q96CU9 486 aaPredicted RBP7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 MRGPRX4Q96LA9 322 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 KLHL5Q96PQ7 755 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 OR5B2Q96R09 309 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 SLC32A1Q9H598 525 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 NOD1Q9Y239 953 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 FLVCR1Q9Y5Y0 555 aa7.87□□□□□ -1.15
SRGAP1-202ENST00000537556 A0A087WUJ7 227 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 GXYLT2A0PJZ3 443 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 TBC1D3BA6NDS4 549 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 RAB40ALP0C0E4 278 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 TBC1D3HP0C7X1 549 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 FAM157CP0CG43 387 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 NME2P22392 152 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 GPR3P46089 330 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 PCBP4P57723 403 aaKnown RBP7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 ATXN7L3Q14CW9 347 aaPredicted RBP7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 RPE65Q16518 533 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 MST1LQ2TV78 715 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 RAB41Q5JT25 222 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 TBC1D3GQ6DHY5 549 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 C1orf94Q6P1W5 598 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 ZNF574Q6ZN55 896 aaPredicted RBP7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 UBE3DQ7Z6J8 389 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 ZNF248Q8NDW4 579 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 OR2A12Q8NGT7 310 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 RAB40AQ8WXH6 277 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 SMIM8Q96KF7 97 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 IP6K3Q96PC2 410 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 GAL3ST4Q96RP7 486 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 ORAI3Q9BRQ5 295 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 NDC1Q9BTX1 674 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 ZNF350Q9GZX5 532 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 SLITRK2Q9H156 845 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 EXO5Q9H790 373 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 OR14J1Q9UGF5 321 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 SIRT4Q9Y6E7 314 aaPredicted RBP7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 A0A1W2PPQ1 181 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 CLDN5O00501 218 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 LDLRAD4O15165 306 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 ACP5P13686 325 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 FABP4P15090 132 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 HNF1AP20823 631 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 LPOP22079 712 aaPredicted RBP7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 DGKAP23743 735 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 IL2RGP31785 369 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 IFNGR2P38484 337 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 P2RX1P51575 399 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 TDGF1P3P51864 188 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 RGS8P57771 180 aaPredicted RBP7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 ACSM2AQ08AH3 577 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 LRRC37A5PQ49AS3 106 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 DMRTA1Q5VZB9 504 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 FRG2Q64ET8 278 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 ACSM2BQ68CK6 577 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 PODNL1Q6PEZ8 512 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 OVCH1Q7RTY7 1134 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 GLT6D1Q7Z4J2 308 aa7.86□□□□□ -1.15
SRGAP1-202ENST00000537556 TEX26Q8N6G2 289 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms