RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 POMT2Q9UKY4 750 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 ERVK-19Q9WJR5 959 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 HS3ST3A1Q9Y663 406 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 ZNF593O00488 134 aaPredicted RBP13.1□□□□□ -0.31
USP44-203ENST00000537435 CTNSO60931 367 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 RABIFP47224 123 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 LEG1Q6P5S2 330 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 LUZP2Q86TE4 346 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 C19orf47Q8N9M1 422 aaKnown RBP13.1□□□□□ -0.31
USP44-203ENST00000537435 MOSPD2Q8NHP6 518 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 RPLP0P6Q8NHW5 317 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 PHYHIPQ92561 330 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 GCDHQ92947 438 aaPredicted RBP13.1□□□□□ -0.31
USP44-203ENST00000537435 BEX1Q9HBH7 125 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 PRTFDC1Q9NRG1 225 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 UCKL1Q9NWZ5 548 aa13.1□□□□□ -0.31
USP44-203ENST00000537435 C4orf47A7E2U8 309 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 PRR32B1ATL7 298 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 NDUFB5O43674 189 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 GLCEO94923 617 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 SEMA4FO95754 770 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 GPR3P46089 330 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 RAG2P55895 527 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 NANOS3P60323 173 aaKnown RBP13.09□□□□□ -0.31
USP44-203ENST00000537435 EIF2B5Q13144 721 aaKnown RBP13.09□□□□□ -0.31
USP44-203ENST00000537435 LINC01590Q5TEZ4 76 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
USP44-203ENST00000537435 ZNF433Q8N7K0 673 aaPredicted RBP13.09□□□□□ -0.31
USP44-203ENST00000537435 GATSQ8NAP1 163 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 CMTM3Q96MX0 182 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 MRPS33Q9Y291 106 aaKnown RBP13.09□□□□□ -0.31
USP44-203ENST00000537435 ZNF281Q9Y2X9 895 aa13.09□□□□□ -0.31
USP44-203ENST00000537435 IGKV1D-42A0A075B6H8 117 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 IFITM5A6NNB3 132 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 BLOC1S5-TXNDC5H3BN57 136 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 AIPO00170 330 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 GPR171O14626 319 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 OR3A3P47888 321 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 PRPS1P60891 318 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.31
USP44-203ENST00000537435 MRPS21P82921 87 aaKnown RBP13.08□□□□□ -0.31
USP44-203ENST00000537435 HSF2Q03933 536 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 PRTGQ2VWP7 1150 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 ZBTB37Q5TC79 503 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 OR56B4Q8NH76 319 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 SLC25A38Q96DW6 304 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 Q96M85 177 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 ALG12Q9BV10 488 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 GPR174Q9BXC1 333 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 OR10A5Q9H207 317 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 NKX2-4Q9H2Z4 354 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 ZNF346Q9UL40 294 aaKnown RBP13.08□□□□□ -0.31
USP44-203ENST00000537435 CLDN16Q9Y5I7 305 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 PIAS3Q9Y6X2 628 aa13.08□□□□□ -0.31
USP44-203ENST00000537435 ANKRD61A6NGH8 418 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 PDCD5O14737 125 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 PRKNO60260 465 aaPredicted RBP13.08□□□□□ -0.32
USP44-203ENST00000537435 NOS1APO75052 506 aaPredicted RBP13.08□□□□□ -0.32
USP44-203ENST00000537435 ZFPL1O95159 310 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 GABRG2P18507 467 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 MAOAP21397 527 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 CDKN2AP42771 156 aaKnown RBP13.08□□□□□ -0.32
USP44-203ENST00000537435 P2RX3P56373 397 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 PER3P56645 1201 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.32
USP44-203ENST00000537435 IL10RAQ13651 578 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 ISXQ2M1V0 245 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 SFRP4Q6FHJ7 346 aaPredicted RBP13.08□□□□□ -0.32
USP44-203ENST00000537435 FCRLAQ7L513 359 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 ZNF511Q8NB15 262 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 RPS4Y2Q8TD47 263 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 C17orf50Q8WW18 174 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 RGP1Q92546 391 aaPredicted RBP13.08□□□□□ -0.32
USP44-203ENST00000537435 LMF1Q96S06 567 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 C20orf85Q9H1P6 137 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 RCE1Q9Y256 329 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 COL4A2P08572 1712 aa13.08□□□□□ -0.32
USP44-203ENST00000537435 A0A087WV48 116 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 ZNF749O43361 778 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 SSNA1O43805 119 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 GMDSO60547 372 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 RPP14O95059 124 aaKnown RBP13.07□□□□□ -0.32
USP44-203ENST00000537435 SULT1A3P0DMM9 295 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 SULT1A4P0DMN0 295 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 CTSEP14091 401 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 DRD1P21728 446 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 DPP4P27487 766 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 AQP2P41181 271 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 CLDN12P56749 244 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 SHHQ15465 462 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 SLC35F3Q8IY50 421 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 ZNF595Q8IYB9 648 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 FAM109AQ8N4B1 249 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 ZNF527Q8NB42 609 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 HMGB4Q8WW32 186 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms