RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 SULT1B1O43704 296 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 SSTR2P30874 369 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 CD68P34810 354 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-209ENST00000537178 OR1Q1Q15612 314 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 SOHLH1Q5JUK2 328 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 TANGO2Q6ICL3 276 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 TMEM71Q6P5X7 295 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 RNF113BQ8IZP6 322 aaKnown RBP9.91□□□□□ -0.82
CLIP1-209ENST00000537178 KDM8Q8N371 416 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 FAM109AQ8N4B1 249 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 OR52E1Q8NGJ3 308 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 FKRPQ9H9S5 495 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 LDB3O75112 727 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 IGHEP01854 428 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 AKR1C1Q04828 323 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 TSPAN31Q12999 210 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 KCNJ8Q15842 424 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 STEAP3Q658P3 488 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 GPR26Q8NDV2 337 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 KCNG3Q8TAE7 436 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 ADAM19Q9H013 955 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 SLC23A2Q9UGH3 650 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 LHX6Q9UPM6 363 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF443Q9Y2A4 671 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-209ENST00000537178 NSG1A0A0A6YYJ2 146 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 SLC9B1P1A6NJY1 282 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 TNFRSF10AO00220 468 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 APOA2P02652 100 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 HLA-DOBP13765 273 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 CPMP14384 443 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 IL4RP24394 825 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 HOXC13P31276 330 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 HTR5AP47898 357 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-209ENST00000537178 HOXC5Q00444 222 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 BCL7AQ4VC05 210 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF789Q5FWF6 425 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 OR8J2Q8NGG1 315 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 PSD2Q9BQI7 771 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 DUSP23Q9BVJ7 150 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 WASH6PQ9NQA3 447 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 COPS3Q9UNS2 423 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 MOKQ9UQ07 419 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 CA5BQ9Y2D0 317 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 WIF1Q9Y5W5 379 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 TCRBV3S1A0A5B6 114 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 PRAMEF27A3QJZ7 478 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 A6NIN4 97 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 A6NL46 340 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 TMEM212A6NML5 194 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 GABRPO00591 440 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 CPT2P23786 658 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 FOXA1P55317 472 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 MTCP1P56278 107 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 BEX5Q5H9J7 111 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 PRAMEF9Q5VWM5 478 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 FAM57BQ71RH2 274 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 TP53INP2Q8IXH6 220 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 PARP16Q8N5Y8 322 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 C15orf54Q8N8G6 183 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 OR7D2Q96RA2 312 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 PAAF1Q9BRP4 392 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 C1orf198Q9H425 327 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 METTL17Q9H7H0 456 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-209ENST00000537178 C1GALT1Q9NS00 363 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 GPR45Q9Y5Y3 372 aa9.91□□□□□ -0.82
CLIP1-209ENST00000537178 BET1O15155 118 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 CD46P15529 392 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 C21orf33P30042 268 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-209ENST00000537178 HENMT1Q5T8I9 393 aaKnown RBP9.9□□□□□ -0.82
CLIP1-209ENST00000537178 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.9□□□□□ -0.82
CLIP1-209ENST00000537178 RBMXL3Q8N7X1 1067 aaKnown RBP9.9□□□□□ -0.82
CLIP1-209ENST00000537178 RAB3CQ96E17 227 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 DTD2Q96FN9 168 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF845Q96IR2 970 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-209ENST00000537178 CDCA3Q99618 268 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-209ENST00000537178 HRASLSQ9HDD0 168 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 PRELID3BQ9Y3B1 194 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 C1QAP02745 245 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 OPRD1P41143 372 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 RAB11AP62491 216 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 CAMK2BQ13554 666 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 DEFB133Q30KQ1 61 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF691Q5VV52 312 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 OR1J2Q8NGS2 313 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 FAM213BQ8TBF2 198 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 GIMAP1Q8WWP7 306 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 LINC01599Q8WXQ3 324 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 TIMM29Q9BSF4 260 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 GDE1Q9NZC3 331 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 hCG_1809904A0A1W2PP81 198 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 A0A1W2PPE2 198 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 A0A1W2PR64 198 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 A0A1W2PRV1 198 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 ICAM2P13598 275 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 CNR1P21554 472 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 TRHRP34981 398 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-209ENST00000537178 SELPLGQ14242 412 aa9.9□□□□□ -0.82
CLIP1-209ENST00000537178 EXOSC7Q15024 291 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms