RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 HOXC12P31275 282 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 RPS5P46782 204 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 NCALDP61601 193 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 VEZF1Q14119 521 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 PPA1Q15181 289 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 MMEL1Q495T6 779 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 OR7E24Q6IFN5 339 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 ZNF613Q6PF04 617 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 CASP12Q6UXS9 341 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 LINC00114Q6XXX2 140 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 ZNF704Q6ZNC4 412 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 CREB3L2Q70SY1 520 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 RANBP3LQ86VV4 465 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 SNX32Q86XE0 403 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 TGIF2LYQ8IUE0 185 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 LRRC75A-AS1Q8N1F1 130 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 UBE2J2Q8N2K1 259 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 PCYOX1LQ8NBM8 494 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 RASSF5Q8WWW0 418 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 TAAR8Q969N4 342 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 ZNF385AQ96PM9 386 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 PCDHAC1Q9H158 963 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 ESRP2Q9H6T0 727 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 TMEM27Q9HBJ8 222 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 SLC7A10Q9NS82 523 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 SLC13A4Q9UKG4 626 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 CAPN7Q9Y6W3 813 aa15.15■□□□□ 0.02
SFSWAP-205ENST00000537164 TRAV36DV7A0A075B6V5 113 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 LOC100653049A0A140TA62 436 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 LOC102725191A0A1B0GVB3 256 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 TMCC2O75069 709 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 KRT34O76011 436 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 PLAUP00749 431 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 SF3A3Q12874 501 aaKnown RBP eCLIP15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 FAPQ12884 760 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 NPTX1Q15818 432 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 GABRA6Q16445 453 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 TSPO2Q5TGU0 170 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 GPAT4Q86UL3 456 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 POMGNT2Q8NAT1 580 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 ADPRHL1Q8NDY3 354 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 C1orf162Q8NEQ5 155 aaPredicted RBP15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 TAMM41Q96BW9 452 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 MUCL1Q96DR8 90 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 SLC41A3Q96GZ6 507 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 ZNF583Q96ND8 569 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 ECSITQ9BQ95 431 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 TMEM43Q9BTV4 400 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 TMUB1Q9BVT8 246 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 SLCO5A1Q9H2Y9 848 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 UBTD1Q9HAC8 227 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 GID8Q9NWU2 228 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 B3GALT5Q9Y2C3 310 aa15.14■□□□□ 0.01
SFSWAP-205ENST00000537164 HS3ST1O14792 307 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 OPN1SWP03999 348 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 CDH12P55289 794 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 FOXG1P55316 489 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 ADAM8P78325 824 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 MFSD13AQ14CX5 517 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 ERICH5Q6P6B1 374 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 AAED1Q7RTV5 226 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 EPHX4Q8IUS5 362 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 C17orf78Q8N4C9 275 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 ZNF611Q8N823 705 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 OR6T1Q8NGN1 323 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 LILRB1Q8NHL6 650 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 RP9Q8TA86 221 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 SLC25A36Q96CQ1 311 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 MCHR1Q99705 422 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 B3GAT1Q9P2W7 334 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 RNF115Q9Y4L5 304 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 SLC25A15Q9Y619 301 aa15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 NIPBLQ6KC79 2804 aaeCLIP15.13■□□□□ 0.01
SFSWAP-205ENST00000537164 PLCE1Q9P212 2302 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 CIB4A0PJX0 185 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 DPRXA6NFQ7 191 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 OR6C65A6NJZ3 312 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 M0R3H8 397 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 AIM2O14862 343 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 CHP2O43745 196 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 CCDC22O60826 627 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 RAD51DO75771 328 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 PAX1P15863 534 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 MPGP29372 298 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 TGFBR3Q03167 851 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 BSPH1Q075Z2 132 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 STK11Q15831 433 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 KRTAP1-3Q8IUG1 177 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 OR4D11Q8NGI4 311 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 OXGR1Q96P68 337 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 EPYCQ99645 322 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 NPAP1Q9NZP6 1156 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 SELENONQ9NZV5 590 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 ARMCX1Q9P291 453 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 UPB1Q9UBR1 384 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 SEC14L4Q9UDX3 406 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 RCE1Q9Y256 329 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 CORINQ9Y5Q5 1042 aa15.12■□□□□ 0.01
SFSWAP-205ENST00000537164 CCT8L1PA6NM43 557 aa15.11■□□□□ 0.01
SFSWAP-205ENST00000537164 M0R082 166 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms