RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	C19orf35	Q6ZS72	473 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	EGFL6	Q8IUX8	553 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	PRR22	Q8IZ63	422 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	SPAG16	Q8N0X2	631 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	FBXL16	Q8N461	479 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	CCDC71L	Q8N9Z2	235 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	FNDC5	Q8NAU1	212 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	NUS1	Q96E22	293 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	PLEKHA8	Q96JA3	519 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	C12orf42	Q96LP6	360 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	OXGR1	Q96P68	337 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	CNN2	Q99439	309 aa	Known RBP	3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	OR51J1	Q9H342	316 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	PLGRKT	Q9HBL7	147 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	PLSCR3	Q9NRY6	295 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	KCNIP1	Q9NZI2	227 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	IL17C	Q9P0M4	197 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	IKZF2	Q9UKS7	526 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	ASF1A	Q9Y294	204 aa		3.88	□□□□□ -1.79
PRKDC-208	ENST00000536710	ATP10A	O60312	1499 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	PPIAL4E	A0A075B759	164 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	CTAGE15	A4D2H0	777 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	GOLGA8O	A6NCC3	632 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	GOLGA8N	F8WBI6	632 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	ABCD4	O14678	606 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	GAPDH	P04406	335 aa	Known RBP	3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	PPIAL4F	P0DN26	164 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	SLC2A5	P22732	501 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	OPRD1	P41143	372 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	GK3P	Q14409	553 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	C11orf71	Q6IPW1	123 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	TMIGD1	Q6UXZ0	262 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	LRRC74B	Q6ZQY2	392 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	CTAGE6	Q86UF2	777 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	FANK1	Q8TC84	345 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	SLC2A14	Q8TDB8	520 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	P2RY13	Q9BPV8	354 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	CCDC77	Q9BR77	488 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	ANKRD19P	Q9H560	264 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	NT5M	Q9NPB1	228 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	KLHL28	Q9NXS3	571 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	SLC2A8	Q9NY64	477 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	NAP1L2	Q9ULW6	460 aa	Predicted RBP	3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	PEX16	Q9Y5Y5	336 aa		3.87	□□□□□ -1.79
PRKDC-208	ENST00000536710	WBP4	O75554	376 aa	Known RBP	3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	BBOX1	O75936	387 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	NDUFB10	O96000	172 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	MCF2	P10911	925 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	ABO	P16442	354 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	TNNI1	P19237	187 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	VDAC2	P45880	294 aa	Predicted RBP	3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	CAV2	P51636	162 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	KPNA2	P52292	529 aa	Known RBP	3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	TLE4	Q04727	773 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	ORC2	Q13416	577 aa	Predicted RBP	3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	NSDHL	Q15738	373 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	PLA2G4D	Q86XP0	818 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	ERI1	Q8IV48	349 aa	Known RBP	3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	OR51S1	Q8NGJ8	323 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	OR9G1	Q8NH87	305 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	KCNG3	Q8TAE7	436 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	PYROXD1	Q8WU10	500 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	FAM151A	Q8WW52	585 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	TECTB	Q96PL2	329 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	SLC25A22	Q9H936	323 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	TM9SF3	Q9HD45	589 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	SPATA7	Q9P0W8	599 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	MMP17	Q9ULZ9	603 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	N6AMT1	Q9Y5N5	214 aa		3.86	□□□□□ -1.79
PRKDC-208	ENST00000536710	HEATR9	A2RTY3	570 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	RBMY1B	A6NDE4	496 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	RBMY1E	A6NEQ0	496 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	ZNF716	A6NP11	495 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	CYSRT1	A8MQ03	144 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	AGPAT2	O15120	278 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	PSTPIP1	O43586	416 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	HCRTR1	O43613	425 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	ERLIN1	O75477	346 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	SUPT7L	O94864	414 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	ACTL6A	O96019	429 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	RBMY1D	P0C7P1	496 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	ZNF735	P0CB33	412 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	RBMY1A1	P0DJD3	496 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	CHML	P26374	656 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	CD1B	P29016	333 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	HNRNPH3	P31942	346 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	GLP1R	P43220	463 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	KIR2DS4	P43632	304 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	ARRB1	P49407	418 aa	Predicted RBP	3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	NDP	Q00604	133 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	ENPEP	Q07075	957 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	BST2	Q10589	180 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	GNMT	Q14749	295 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	HERPUD1	Q15011	391 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	PPP1R7	Q15435	360 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	PAGE3	Q5JUK9	113 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	C1orf100	Q5SVJ3	147 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	RNASEK	Q6P5S7	137 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	C6orf223	Q8N319	242 aa		3.85	□□□□□ -1.79
PRKDC-208	ENST00000536710	TPRX1	Q8N7U7	411 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 10 ms