RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 DCAF16Q9NXF7 216 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 ERVW-1Q9UQF0 538 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 MEMO1Q9Y316 297 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 ATP10AO60312 1499 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 A0A0G2JRQ6 117 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 UBXN8O00124 270 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 OR10H3O60404 316 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 SCGNO76038 276 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 POU2F1P14859 743 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 IMPDH1P20839 514 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 MAGP20916 626 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 ANXA13P27216 316 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 RPS14P62263 151 aaKnown RBP2.99□□□□□ -1.93
PRKDC-205ENST00000535375 SELENOTP62341 195 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 RPL23AP62750 156 aaKnown RBP2.99□□□□□ -1.93
PRKDC-205ENST00000535375 NCBP1Q09161 790 aaKnown RBP2.99□□□□□ -1.93
PRKDC-205ENST00000535375 NRF1Q16656 503 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 OR4F3Q6IEY1 312 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 CCDC80Q76M96 950 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 TPRA1Q86W33 373 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 SVOPLQ8N434 492 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 OR4D9Q8NGE8 314 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 ZNF721Q8TF20 911 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 CNDP1Q96KN2 507 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 OR2M2Q96R28 347 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 KCNA7Q96RP8 456 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 CTRCQ99895 268 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 SCRT1Q9BWW7 348 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 GON7Q9BXV9 100 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 NXF5Q9H1B4 397 aaKnown RBP2.99□□□□□ -1.93
PRKDC-205ENST00000535375 VCPKMTQ9H867 229 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 NUDT15Q9NV35 164 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 CDH9Q9ULB4 789 aa2.99□□□□□ -1.93
PRKDC-205ENST00000535375 XKRY2A2RUG3 117 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 SNTNA6NMZ2 147 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 ERVV-1B6SEH8 477 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 F5H6K3 240 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 FAM189A1O60320 539 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 LRATO95237 230 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 MAP3K8P41279 467 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 TDO2P48775 406 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 HSPA2P54652 639 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 TAS2R19P59542 299 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 KLRC3Q07444 240 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 KLRB1Q12918 225 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 ZMYND11Q15326 602 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 FILIP1LQ4L180 1135 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 BOLA3Q53S33 107 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 KCNIP4Q6PIL6 250 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 ZYG11AQ6WRX3 759 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 ACP7Q6ZNF0 438 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 OR2L13Q8N349 312 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 MFSD9Q8NBP5 474 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 DUSP18Q8NEJ0 188 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 HIST1H4GQ99525 98 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 TSG101Q99816 390 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 KLHDC3Q9BQ90 382 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 TCHPQ9BT92 498 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 SMYD3Q9H7B4 428 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 NECAP2Q9NVZ3 263 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 ADAM28Q9UKQ2 775 aa2.98□□□□□ -1.93
PRKDC-205ENST00000535375 CLSPNQ9HAW4 1339 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 FAM240BA0A1B0GVZ2 78 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 AP3B1O00203 1094 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 DLGAP1O14490 977 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 CXCL13O43927 109 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 PRKYO43930 277 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 N4BP1O75113 896 aaKnown RBP2.97□□□□□ -1.93
PRKDC-205ENST00000535375 TSPAN12O95859 305 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 PTGDSP41222 190 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 SULT1E1P49888 294 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 DUSP3P51452 185 aaPredicted RBP2.97□□□□□ -1.93
PRKDC-205ENST00000535375 PRKXP51817 358 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 CRYBB1P53674 252 aaPredicted RBP2.97□□□□□ -1.93
PRKDC-205ENST00000535375 BIDP55957 195 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 HMGN5P82970 282 aaKnown RBP2.97□□□□□ -1.93
PRKDC-205ENST00000535375 TGFBR3Q03167 851 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 FGL1Q08830 312 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 C6orf89Q6UWU4 347 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 NKAPP1Q8N9T2 125 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 SCFD1Q8WVM8 642 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 RAPGEF5Q92565 580 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 MRPS31Q92665 395 aaKnown RBP2.97□□□□□ -1.93
PRKDC-205ENST00000535375 CCNL2Q96S94 520 aaPredicted RBP2.97□□□□□ -1.93
PRKDC-205ENST00000535375 GCOM2Q9BZD3 368 aaPredicted RBP2.97□□□□□ -1.93
PRKDC-205ENST00000535375 MCCC2Q9HCC0 563 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 KIF25Q9UIL4 384 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 PIGLQ9Y2B2 252 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 TP53TG5Q9Y2B4 290 aa2.97□□□□□ -1.93
PRKDC-205ENST00000535375 IGHV3OR16-13A0A075B7E8 117 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 A0A1W2PPE3 182 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 CCDC169A6NNP5 214 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 TIMM8AO60220 97 aaPredicted RBP2.96□□□□□ -1.94
PRKDC-205ENST00000535375 RAMP3O60896 148 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 HMMRO75330 724 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 FOXH1O75593 365 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 PLEKP08567 350 aaPredicted RBP2.96□□□□□ -1.94
PRKDC-205ENST00000535375 PNMA6AP0CW24 399 aaPredicted RBP2.96□□□□□ -1.94
PRKDC-205ENST00000535375 CRISP2P16562 243 aa2.96□□□□□ -1.94
PRKDC-205ENST00000535375 ATP6V1B2P21281 511 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms