RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 hCG_2039718K7EN88 272 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 K7EQS6 105 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TLR4O00206 839 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 XPO1O14980 1071 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 FLRT2O43155 660 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 BUB1O43683 1085 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TBX19O60806 448 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 CIB2O75838 187 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 DUS4LO95620 317 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 GOT2P00505 430 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 IGLV3-25P01717 112 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 IGLV3-27P01718 113 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TFPTP0C1Z6 253 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 FAM228BP0C875 321 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 SP9P0CG40 484 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 MBL2P11226 248 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 ICAM2P13598 275 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TCF4P15884 667 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 GATA1P15976 413 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 AZGP1P25311 298 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 CTNNA2P26232 953 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 PIK3R1P27986 724 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 GCAP28676 217 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 IFNA8P32881 189 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 HAAOP46952 286 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 HSPA13P48723 471 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 DHPSP49366 369 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 NUMBP49757 651 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 KLK7P49862 253 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 SMSP52788 366 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 IST1P53990 364 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 AQP4P55087 323 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TMEM50BP56557 158 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 C21orf59P57076 290 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 DAOAP59103 153 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 SSTP61278 116 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 POLR2GP62487 172 aaKnown RBP eCLIP2.87□□□□□ -1.95
USP48-215ENST00000534705 POLR2LP62875 67 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 BST2Q10589 180 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 CALCOCO2Q13137 446 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 EIF4EBP2Q13542 120 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 VEZF1Q14119 521 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 SIX1Q15475 284 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 TAB1Q15750 504 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 ACKR1Q16570 336 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 GOLGA7BQ2TAP0 167 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 SLC36A3Q495N2 470 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 KCTD21Q4G0X4 260 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 DNAL1Q4LDG9 190 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TMEM41BQ5BJD5 291 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 PMF1Q6P1K2 205 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 FRRS1Q6ZNA5 592 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 CYP4V2Q6ZWL3 525 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 ASCL5Q7RTU5 278 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 NT5DC3Q86UY8 548 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 RALGPS2Q86X27 583 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 CATSPERDQ86XM0 798 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 NKAIN4Q8IVV8 208 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 BBS7Q8IWZ6 715 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 AQP12AQ8IXF9 295 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 ZNF679Q8IYX0 411 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 CENPLQ8N0S6 344 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 FAM89BQ8N5H3 189 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 AMER3Q8N944 861 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 SUMF1Q8NBK3 374 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 BBOF1Q8ND07 529 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 CATSPER1Q8NEC5 780 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 FAM71CQ8NEG0 241 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TTLQ8NG68 377 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 OR5T2Q8NGG2 359 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 OR52K1Q8NGK4 314 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 UBA3Q8TBC4 463 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 FBXO25Q8TCJ0 367 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 DTX3LQ8TDB6 740 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 RNASE8Q8TDE3 154 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 SLC26A7Q8TE54 656 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 SELENOMQ8WWX9 145 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 FAM3CQ92520 227 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 SLCO4A1Q96BD0 722 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 DUS3LQ96G46 650 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 MSANTD3Q96H12 275 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 PIWIL1Q96J94 861 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 PCDHB18PQ96TA0 734 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 C17orf62Q9BQA9 187 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 PIGQQ9BRB3 760 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TUBGCP2Q9BSJ2 902 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 MED10Q9BTT4 135 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 ULBP1Q9BZM6 244 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 RAB33BQ9H082 229 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 UBQLN3Q9H347 655 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 MFSD1Q9H3U5 465 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 GOLPH3Q9H4A6 298 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 FBXO44Q9H4M3 255 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 RPF2Q9H7B2 306 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 C8orf33Q9H7E9 229 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 SP140LQ9H930 580 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 MARCH7Q9H992 704 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 GPN2Q9H9Y4 310 aaPredicted RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 DIABLOQ9NR28 239 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 GSN-AS1Q9NRJ2 163 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms