RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 DBPQ10586 325 aaPredicted RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 MERTKQ12866 999 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 CBFBQ13951 182 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 SLC17A1Q14916 467 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 NKPD1Q17RQ9 610 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 ALKBH6Q3KRA9 238 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 GGTA1PQ4G0N0 100 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 ATP6AP1LQ52LC2 224 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD44-237ENST00000534082 FAM219BQ5XKK7 198 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 ZNF620Q6ZNG0 422 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 RAPH1Q70E73 1250 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 SZRD1Q7Z422 152 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 PDIK1LQ8N165 341 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 TMEM86BQ8N661 226 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 ZNF614Q8N883 585 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 CDRT4Q8N9R6 151 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 OR4F6Q8NGB9 312 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 OR52E2Q8NGJ4 325 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 OR5W2Q8NH69 310 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 CDC26Q8NHZ8 85 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 C16orf78Q8WTQ4 265 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 ST8SIA1Q92185 356 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 ANP32BQ92688 251 aaKnown RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 MAGOHBQ96A72 148 aaKnown RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 TMEM45BQ96B21 275 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 AURKBQ96GD4 344 aaPredicted RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 EBPLQ9BY08 206 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 MIEF1Q9NQG6 463 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 SIRT3Q9NTG7 399 aaPredicted RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 VPS29Q9UBQ0 182 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 GRID1Q9ULK0 1009 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 NFU1Q9UMS0 254 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 TNPO3Q9Y5L0 923 aaKnown RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 NOX1Q9Y5S8 564 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 INSIG2Q9Y5U4 225 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 SPIN1Q9Y657 262 aaPredicted RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 CACNG2Q9Y698 323 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 TEX264Q9Y6I9 313 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 TET2Q6N021 2002 aaPredicted RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 CSMD3Q7Z407 3707 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 PLECQ15149 4684 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 ZNF503-AS2A6NEH8 195 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 C17orf100A8MU93 164 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 DNALI1O14645 258 aaPredicted RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 GPR137BO60478 399 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 FBXO24O75426 580 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 HSPA4LO95757 839 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 UBL4AP11441 157 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 ATP6V1C1P21283 382 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 GLRXP35754 106 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 ARR3P36575 388 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 PRKAG1P54619 331 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 SESN3P58005 492 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 RPS23P62266 143 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 TEKQ02763 1124 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 HSPB3Q12988 150 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 PCGF3Q3KNV8 242 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 KLHL26Q53HC5 615 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 FOXB2Q5VYV0 432 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 METTL2BQ6P1Q9 378 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 TMEM154Q6P9G4 183 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 CCDC137Q6PK04 289 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 PAQR6Q6TCH4 344 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 LRIG3Q6UXM1 1119 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 BRD3OSQ6XYD6 125 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 USP51Q70EK9 711 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 CBLL1Q75N03 491 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 LINGO2Q7L985 606 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 AAED1Q7RTV5 226 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 CMC1Q7Z7K0 106 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 MDP1Q86V88 176 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 ZBED8Q8IZ13 594 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 PTGR2Q8N8N7 351 aaPredicted RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 IL17RDQ8NFM7 739 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 RHEBL1Q8TAI7 183 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 GIMAP5Q96F15 307 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 MARS2Q96GW9 593 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 MS4A4EQ96PG1 132 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 ZNF385AQ96PM9 386 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 OR11A1Q9GZK7 315 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 VPS11Q9H270 941 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 PRDM13Q9H4Q3 707 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 HINT3Q9NQE9 182 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 GAR1Q9NY12 217 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 CPSF2Q9P2I0 782 aaKnown RBP5.44□□□□□ -1.54
CD44-237ENST00000534082 TXNDC16Q9P2K2 825 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 DUSP13Q9UII6 198 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 PCTPQ9UKL6 214 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 SNX6Q9UNH7 406 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 HDGFL3Q9Y3E1 203 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 PCDHGB5Q9Y5G0 923 aa5.44□□□□□ -1.54
CD44-237ENST00000534082 LCE6AA0A183 80 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 AGAP5A6NIR3 686 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 ZNF264O43296 627 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 TPD52L2O43399 206 aaKnown RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 XPNPEP2O43895 674 aa5.43□□□□□ -1.54
CD44-237ENST00000534082 EIF4E2O60573 245 aaKnown RBP5.43□□□□□ -1.54
CD44-237ENST00000534082 CYP7B1O75881 506 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms