RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CENPEQ02224 2701 aa10.65□□□□□ -0.7
SSBP3-214ENST00000533209 TCRBV5S2A0A599 114 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 LRRN3E7EW58 273 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 M0R082 166 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 GPR171O14626 319 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 CBLP22681 906 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 UQCRC1P31930 480 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 NTF4P34130 210 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 RBM34P42696 430 aaKnown RBP10.64□□□□□ -0.71
SSBP3-214ENST00000533209 UGT2B15P54855 530 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 VLDLRP98155 873 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 ST3GAL3Q11203 375 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 MFSD13AQ14CX5 517 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF787Q6DD87 383 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 LCN8Q6JVE9 175 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 TFAP2EQ6VUC0 442 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 CYP2R1Q6VVX0 501 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 MEX3BQ6ZN04 569 aaKnown RBP10.64□□□□□ -0.71
SSBP3-214ENST00000533209 GALNT5Q7Z7M9 940 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 DHFR2Q86XF0 187 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 DMRTC2Q8IXT2 367 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-214ENST00000533209 ZIC4Q8N9L1 334 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF417Q8TAU3 575 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 LRRC46Q96FV0 321 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF587Q96SQ5 575 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-214ENST00000533209 SPOCK3Q9BQ16 436 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 SF3B5Q9BWJ5 86 aaKnown RBP10.64□□□□□ -0.71
SSBP3-214ENST00000533209 MUC13Q9H3R2 512 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 RHCGQ9UBD6 479 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 RASD1Q9Y272 281 aa10.64□□□□□ -0.71
SSBP3-214ENST00000533209 CRYBG3Q68DQ2 2970 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 CELSR2Q9HCU4 2923 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 hCG_2039718K7EN88 272 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 KPNA4O00629 521 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 ACOT8O14734 319 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 DNAJC8O75937 253 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 VAMP5O95183 116 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 MT-ATP6P00846 226 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 GTF2E2P29084 291 aaKnown RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 IFNA8P32881 189 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 CD79BP40259 229 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 OR3A2P47893 321 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 PCYT1AP49585 367 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 CBX1P83916 185 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 FAM27E3Q08E93 113 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 FOXD4Q12950 439 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 SNTB1Q13884 538 aaKnown RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF74Q16587 644 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 MTX3Q5HYI7 312 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 TMEM225Q6GV28 225 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 H1FNTQ75WM6 255 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 SLC46A3Q7Z3Q1 461 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 C10orf53Q8N6V4 93 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 SCAIQ8N9R8 606 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 ADPRHL1Q8NDY3 354 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 PIK3C3Q8NEB9 887 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 OR9K2Q8NGE7 335 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 PFN4Q8NHR9 129 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 TMEM239Q8WW34 195 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 CCDC124Q96CT7 223 aaKnown RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 ASB9Q96DX5 294 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 HS6ST2Q96MM7 605 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 FNDC11Q9BVV2 318 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 CADM1Q9BY67 442 aaKnown RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 C6orf203Q9P0P8 240 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 B3GAT1Q9P2W7 334 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 B3GALT5Q9Y2C3 310 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 NOSIPQ9Y314 301 aaKnown RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 CORINQ9Y5Q5 1042 aa10.63□□□□□ -0.71
SSBP3-214ENST00000533209 ANKHD1Q8IWZ3 2542 aaKnown RBP10.63□□□□□ -0.71
SSBP3-214ENST00000533209 MPDZO75970 2070 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 HCFC1P51610 2035 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 LOC102725191A0A1B0GVB3 256 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 ENO4A6NNW6 628 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 MS4A18H0YCH9 400 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 PLPP3O14495 311 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 GSC2O15499 205 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 PIP5K1CO60331 668 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 ATP5HO75947 161 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 DIRAS1O95057 198 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 CH25HO95992 272 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 HPRP00739 348 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 IGF2P01344 180 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 MT-ND1P03886 318 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 COX6B1P14854 86 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 RHCEP18577 417 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 CCKARP32238 428 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 LSM11P83369 360 aaKnown RBP eCLIP10.62□□□□□ -0.71
SSBP3-214ENST00000533209 SORDQ00796 357 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 TRAP1Q12931 704 aaKnown RBP10.62□□□□□ -0.71
SSBP3-214ENST00000533209 TRAM2Q15035 370 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 POU4F3Q15319 338 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 EXOC3L2Q2M3D2 409 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 MS4A18Q3C1V0 323 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 BEND4Q6ZU67 534 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 CREB3L2Q70SY1 520 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.62□□□□□ -0.71
SSBP3-214ENST00000533209 GPAT4Q86UL3 456 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 STK32CQ86UX6 486 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 CYP4Z1Q86W10 505 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms