RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ARMC7Q9H6L4 198 aa10.08□□□□□ -0.8
TRAPPC4-213ENST00000533149 CDHR4A6H8M9 788 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR6C70A6NIJ9 312 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 GNB5O14775 395 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 FRS3O43559 492 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 HCRTR2O43614 444 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 UGT2B11O75310 529 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 BCAS1O75363 584 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 OXSR1O95747 527 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 TGM6O95932 706 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CD8BP10966 210 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 HPGDP15428 266 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 RHCEP18577 417 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 PEX2P28328 305 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 VHLP40337 213 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 HOXC5Q00444 222 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 PPP1R8Q12972 351 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 EFR3AQ14156 821 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 NPTX1Q15818 432 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZSWIM7Q19AV6 140 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 MRPL2Q5T653 305 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 RNF220Q5VTB9 566 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 ANKRD34AQ69YU3 496 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 ADAM5Q6NVV9 412 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 APOOLQ6UXV4 268 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 C12orf54Q6X4T0 127 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 DEF8Q6ZN54 512 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CHMP1BQ7LBR1 199 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 NUP54Q7Z3B4 507 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CYP4Z1Q86W10 505 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR14L1PQ8NHC6 308 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 OIT3Q8WWZ8 545 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 PLPPR2Q96GM1 343 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 HS6ST2Q96MM7 605 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 COQ10BQ9H8M1 238 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 VNN3Q9NY84 501 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.07□□□□□ -0.86e-7■■□□□ 13.4
TRAPPC4-213ENST00000533149 ANK2Q01484 3957 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 SLC22A20A6NK97 555 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 PDLIM1O00151 329 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 GTPBP1O00178 669 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 TNFRSF11BO00300 401 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 SCDO00767 359 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 AP3D1O14617 1153 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 FFAR1O14842 300 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 FADS1O60427 444 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 TPST2O60704 377 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 ICOSLGO75144 302 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CBR3O75828 277 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 IGHV4-39P01824 125 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 THBDP07204 575 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 NGFRP08138 427 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 SOD3P08294 240 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 GKN3PP0CG01 181 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 PRG2P13727 222 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CFPP27918 469 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 RRM2P31350 389 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CDKN1AP38936 164 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 KIR2DL2P43627 348 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 RGS8P57771 180 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CYB5R2Q6BCY4 276 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZBTB49Q6ZSB9 765 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 TMEM179BQ7Z7N9 219 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 MARCH3Q86UD3 253 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 MEX3DQ86XN8 651 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CMIPQ8IY22 773 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF527Q8NB42 609 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR5K1Q8NHB7 308 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 HGDQ93099 445 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 FBXW5Q969U6 566 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 EME1Q96AY2 570 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 DTNBP1Q96EV8 351 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 NODALQ96S42 347 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 MCHR1Q99705 422 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 SLC29A1Q99808 456 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 CIB1Q99828 191 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 TACO1Q9BSH4 297 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR2B2Q9GZK3 357 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 VCX3BQ9H321 246 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 ESRP2Q9H6T0 727 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 EVA1AQ9H8M9 152 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 REEP1Q9H902 201 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 ACER3Q9NUN7 267 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 RHCGQ9UBD6 479 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 OAZ3Q9UMX2 235 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 SAMHD1Q9Y3Z3 626 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 U3KQV3 271 aa10.07□□□□□ -0.8
TRAPPC4-213ENST00000533149 MED12LQ86YW9 2145 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 G3V2T6 193 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 H3BNH8 94 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 OIP5O43482 229 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 E2F6O75461 281 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 CYP7B1O75881 506 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 CSTAP01040 98 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 CGAP01215 116 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 DANCRP0C864 163 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF708P17019 499 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 ZNF23P17027 643 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 FUT4P22083 530 aa10.06□□□□□ -0.8
TRAPPC4-213ENST00000533149 LHX2P50458 406 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms