RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 EXOSC3Q9NQT5 275 aaKnown RBP13.59□□□□□ -0.23
CAPN1-224ENST00000533129 KLF2Q9Y5W3 355 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-224ENST00000533129 DNASE2O00115 360 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-224ENST00000533129 PTP4A3O75365 173 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 HPP00738 406 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 IFNGP01579 166 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 FCER2P06734 321 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 TNFRSF4P43489 277 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 TSFMP43897 325 aaKnown RBP13.59□□□□□ -0.23
CAPN1-224ENST00000533129 ZNF660Q6AZW8 331 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-224ENST00000533129 FCRLAQ7L513 359 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 OR5T2Q8NGG2 359 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 OR2A1Q8NGT9 310 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 NSMAFQ92636 917 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 DMRTA2Q96SC8 542 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 SLC38A3Q99624 504 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 MACROD1Q9BQ69 325 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 TTTY10Q9BZA0 68 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 MED31Q9Y3C7 131 aa13.59□□□□□ -0.23
CAPN1-224ENST00000533129 CENPVL1A0A0U1RR11 272 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 A0A1B0GW55 424 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 MPTX1A8MV57 137 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 FMO6PO60774 539 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 PPP1R3DO95685 299 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 DUX4L2P0CJ85 424 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 DUX4L3P0CJ86 424 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 DUX4L4P0CJ87 422 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 DUX4L5P0CJ88 424 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 DUX4L6P0CJ89 424 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 DUX4L7P0CJ90 424 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 DCTDP32321 178 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 LTBRP36941 435 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 ARHGAP11AQ6P4F7 1023 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 MCATQ8IVS2 390 aaKnown RBP13.58□□□□□ -0.24
CAPN1-224ENST00000533129 C1orf216Q8TAB5 229 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 CNN2Q99439 309 aaKnown RBP13.58□□□□□ -0.24
CAPN1-224ENST00000533129 NPAS1Q99742 590 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 SLC6A20Q9NP91 592 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 DUX4Q9UBX2 424 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 CEP290O15078 2479 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 TRAV27A0A087WT01 109 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 FXYD6-FXYD2A0A087WZ82 144 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 PIN1P1O15428 100 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 SLC35G4P0C7Q5 338 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 RPS4Y1P22090 263 aaKnown RBP13.58□□□□□ -0.24
CAPN1-224ENST00000533129 EDNRAP25101 427 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 P2RY2P41231 377 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 H2BFSP57053 126 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 GMFBP60983 142 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 GGTLC2Q14390 218 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 AMZ1Q400G9 498 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 PWWP2BQ6NUJ5 590 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 FAAP20Q6NZ36 180 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 ATRAIDQ6UW56 229 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 SLC36A1Q7Z2H8 476 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 NRROSQ86YC3 692 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 SERPINA12Q8IW75 414 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 SLC43A2Q8N370 569 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 OR7G2Q8NG99 324 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 OR6K3Q8NGY3 331 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 SYNPRQ8TBG9 265 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 OR1F2PQ96R84 312 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 PDCD1LG2Q9BQ51 273 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 GINS4Q9BRT9 223 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 FXYD6Q9H0Q3 95 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 ZDHHC4Q9NPG8 344 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 ICAM5Q9UMF0 924 aa13.58□□□□□ -0.24
CAPN1-224ENST00000533129 LAMA3Q16787 3333 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 F5H5P2 479 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 MAGEB4O15481 346 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 APOC3P02656 99 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 CALCBP10092 127 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 HCCSP53701 268 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 COL19A1Q14993 1142 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 LSRQ86X29 649 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 SMRP1Q8NCR6 262 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 OR5M1Q8NGP8 315 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 ZDHHC1Q8WTX9 485 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 SNX33Q8WV41 574 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 ASB13Q8WXK3 278 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 ORAI1Q96D31 301 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 HAVCR1Q96D42 359 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 LRFN5Q96NI6 719 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 DNTTIP1Q9H147 329 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 RSPH9Q9H1X1 276 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 SLC25A32Q9H2D1 315 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 C6orf106Q9H6K1 298 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 EVA1AQ9H8M9 152 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 MCCC2Q9HCC0 563 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 POT1Q9NUX5 634 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 PYCARD-AS1I3L0S3 204 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 DBIP07108 87 aaKnown RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 GKN3PP0CG01 181 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 VSIG10L2P0DP72 767 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 CBFBQ13951 182 aa13.57□□□□□ -0.24
CAPN1-224ENST00000533129 COL9A2Q14055 689 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 RBMS2Q15434 407 aaKnown RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 COL13A1Q5TAT6 717 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-224ENST00000533129 C17orf107Q6ZR85 190 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms