RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ATP6V1G1O75348 118 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 MSX1P28360 303 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 SLC1A3P43003 542 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 UCNP55089 124 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 FHL1Q13642 323 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 SMARCD3Q6STE5 483 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 LRRC17Q8N6Y2 441 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 FADS6Q8N9I5 356 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 SMAD5Q99717 465 aaKnown RBP16.73■□□□□ 0.27
SMPD1-208ENST00000533123 NPAS1Q99742 590 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 RPL36Q9Y3U8 105 aaKnown RBP16.73■□□□□ 0.27
SMPD1-208ENST00000533123 PIEZO2Q9H5I5 2752 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 CDK2AP1O14519 115 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 TRIM3O75382 744 aaPredicted RBP16.72■□□□□ 0.27
SMPD1-208ENST00000533123 APOL3O95236 402 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 SP1P08047 785 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 ADORA3P0DMS8 318 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 TCEA1P23193 301 aaKnown RBP16.72■□□□□ 0.27
SMPD1-208ENST00000533123 CD97P48960 835 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 CXADRP78310 365 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 DBPQ10586 325 aaPredicted RBP16.72■□□□□ 0.27
SMPD1-208ENST00000533123 IRF3Q14653 427 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 UBE2UQ5VVX9 321 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 TIGD3Q6B0B8 471 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 SLC25A25Q6KCM7 469 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 ATG4DQ86TL0 474 aaPredicted RBP16.72■□□□□ 0.27
SMPD1-208ENST00000533123 OAFQ86UD1 273 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 OR52L1Q8NGH7 329 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 TMEM41AQ96HV5 264 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 TNFRSF13CQ96RJ3 184 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 MCCC2Q9HCC0 563 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 TAS2R10Q9NYW0 307 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 ELOA3DA6NLF2 546 aaPredicted RBP16.72■□□□□ 0.27
SMPD1-208ENST00000533123 BHLHE40O14503 412 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 PTP4A3O75365 173 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 PIPP12273 146 aaPredicted RBP16.72■□□□□ 0.27
SMPD1-208ENST00000533123 TNFSF10P50591 281 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 SUMO3P55854 103 aaPredicted RBP16.72■□□□□ 0.27
SMPD1-208ENST00000533123 DOC2BQ14184 412 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 ELOA3BQ3SY89 546 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 SLC35F1Q5T1Q4 408 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 MEDAGQ5VYS4 303 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 POMZP3Q6PJE2 187 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 SLC16A12Q6ZSM3 486 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 GALNTL5Q7Z4T8 443 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 SULF2Q8IWU5 870 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 ANKK1Q8NFD2 765 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 ELOA3Q8NG57 546 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 EXTL1Q92935 676 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 PLEKHA8Q96JA3 519 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 IFT27Q9BW83 186 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 PRRG3Q9BZD7 231 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 PTGES2Q9H7Z7 377 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 MED17Q9NVC6 651 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 MED12Q93074 2177 aa16.72■□□□□ 0.27
SMPD1-208ENST00000533123 RCBTB2O95199 551 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 GP1BBP13224 206 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 CD46P15529 392 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 BMP7P18075 431 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 TACR3P29371 465 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 TMBIM6P55061 237 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 GXYLT1Q4G148 440 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 BBS1Q8NFJ9 593 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 SGTBQ96EQ0 304 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 TEX12Q9BXU0 123 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 MPDZO75970 2070 aa16.71■□□□□ 0.27
SMPD1-208ENST00000533123 FREM3P0C091 2139 aa16.71■□□□□ 0.26
SMPD1-208ENST00000533123 TRIM64BA6NI03 449 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 FAM183AA6NL82 134 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 HCN1O60741 890 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 PRKCAP17252 672 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF41P51814 821 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-208ENST00000533123 TBR1Q16650 682 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 OR2M7Q8NG81 312 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 TBC1D15Q8TC07 691 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 YIPF6Q96EC8 236 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 C1GALT1C1Q96EU7 318 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 C5orf34Q96MH7 638 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 FAM173AQ9BQD7 235 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 CDCA4Q9BXL8 241 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 ADAM19Q9H013 955 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 CLEC2DQ9UHP7 191 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 A0A1W2PPW3 197 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 LRRC3CA6NJW4 275 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 KDM4EB2RXH2 506 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-208ENST00000533123 SHISA8B8ZZ34 492 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 BOLA2-SMG1P6H3BVE0 249 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 PRODHO43272 600 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 NME2P1O60361 137 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 NOL3O60936 208 aaKnown RBP16.7■□□□□ 0.26
SMPD1-208ENST00000533123 INHBBP09529 407 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 RFPL3SP0C7P2 107 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 CCNA2P20248 432 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 NME2P22392 152 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 RFC3P40938 356 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 FOXK1P85037 733 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 FOXO1Q12778 655 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF829Q3KNS6 432 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-208ENST00000533123 ZNF766Q5HY98 468 aa16.7■□□□□ 0.26
SMPD1-208ENST00000533123 FCGR1BQ92637 280 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms