RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SLC25A36Q96CQ1 311 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 MCHR1Q99705 422 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.24
CPSF1-210ENST00000532935 CCM2LQ9NUG4 571 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-210ENST00000532935 PARPBPQ9NWS1 579 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 ITPR3Q14573 2671 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 HIVEP1P15822 2718 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 TRAV36DV7A0A075B6V5 113 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 A0A087WUJ7 227 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-210ENST00000532935 CCT8L1PA6NM43 557 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 FAM220BPB1ANY3 271 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 OR2T1O43869 369 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 DCTN3O75935 186 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 VAMP5O95183 116 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 RAF1P04049 648 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 GTF2E2P29084 291 aaKnown RBP13.57□□□□□ -0.24
CPSF1-210ENST00000532935 VEZF1Q14119 521 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 TAB1Q15750 504 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 SWT1Q5T5J6 900 aaKnown RBP13.57□□□□□ -0.24
CPSF1-210ENST00000532935 ZNF613Q6PF04 617 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 P3H2Q8IVL5 708 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 ZIC4Q8N9L1 334 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 OR4D11Q8NGI4 311 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 VANGL1Q8TAA9 524 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-210ENST00000532935 HSD17B8Q92506 261 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 TAAR8Q969N4 342 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 TMEM45BQ96B21 275 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 HS3ST6Q96QI5 342 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 ASB6Q9NWX5 421 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 MALT1Q9UDY8 824 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 RASD1Q9Y272 281 aa13.57□□□□□ -0.24
CPSF1-210ENST00000532935 PRRC2AP48634 2157 aaKnown RBP13.56□□□□□ -0.24
CPSF1-210ENST00000532935 AIM2O14862 343 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 FZD7O75084 574 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 ATE1O95260 518 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 ART1P52961 327 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 CDH12P55289 794 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 FAPQ12884 760 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 ENTPD8Q5MY95 495 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 FAM69AQ5T7M9 428 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 ALKBH2Q6NS38 261 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 TRPM8Q7Z2W7 1104 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 ARPINQ7Z6K5 226 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 RBM45Q8IUH3 476 aaKnown RBP13.56□□□□□ -0.24
CPSF1-210ENST00000532935 ZNF433Q8N7K0 673 aaPredicted RBP13.56□□□□□ -0.24
CPSF1-210ENST00000532935 OR2T12Q8NG77 320 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 PLPPR2Q96GM1 343 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 ZNF385AQ96PM9 386 aaKnown RBP13.56□□□□□ -0.24
CPSF1-210ENST00000532935 MYLK2Q9H1R3 596 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 CMTM6Q9NX76 183 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 AP3M1Q9Y2T2 418 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 ZNF469Q96JG9 3925 aaPredicted RBP13.56□□□□□ -0.24
CPSF1-210ENST00000532935 F8P00451 2351 aa13.56□□□□□ -0.24
CPSF1-210ENST00000532935 CADP27708 2225 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 TEP1Q99973 2627 aaKnown RBP13.55□□□□□ -0.24
CPSF1-210ENST00000532935 CPSF4LA6NMK7 179 aaKnown RBP13.55□□□□□ -0.24
CPSF1-210ENST00000532935 GGT1P19440 569 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 NR1H2P55055 460 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 KEAP1Q14145 624 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 STK11Q15831 433 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 AAED1Q7RTV5 226 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 MICU2Q8IYU8 434 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 KDM8Q8N371 416 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 OR6S1Q8NH40 331 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 PROX1Q92786 737 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 MBD6Q96DN6 1003 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 EPYCQ99645 322 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 FOXC2Q99958 501 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 HOPXQ9BPY8 73 aaPredicted RBP13.55□□□□□ -0.24
CPSF1-210ENST00000532935 TMEM43Q9BTV4 400 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 PCDHAC1Q9H158 963 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 EFCAB1Q9HAE3 211 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 SLC7A10Q9NS82 523 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 TAS2R16Q9NYV7 291 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 UPB1Q9UBR1 384 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 SEC14L4Q9UDX3 406 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 BAG5Q9UL15 447 aa13.55□□□□□ -0.24
CPSF1-210ENST00000532935 HEATR1Q9H583 2144 aaKnown RBP13.55□□□□□ -0.24
CPSF1-210ENST00000532935 MED13LQ71F56 2210 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 CIB4A0PJX0 185 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 ELOVL7A1L3X0 281 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 M0R082 166 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 PDLIM1O00151 329 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 CHP2O43745 196 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 RAD51DO75771 328 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 IFNA14P01570 189 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 ITGA5P08648 1049 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 PTNP21246 168 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 GRPRP30550 384 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 KDELR2P33947 212 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 FOXG1P55316 489 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-210ENST00000532935 MFSD13AQ14CX5 517 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 PPA1Q15181 289 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 TIMM23BQ5SRD1 257 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 TSPO2Q5TGU0 170 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 C8orf82Q6P1X6 216 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-210ENST00000532935 SEZ6L2Q6UXD5 910 aa13.54□□□□□ -0.24
CPSF1-210ENST00000532935 LINC00114Q6XXX2 140 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms