RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FGL1Q08830 312 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 RIPPLY1Q0D2K3 151 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 LTB4RQ15722 352 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 CARTPTQ16568 116 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 DUSP5Q16690 384 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 GUK1Q16774 197 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 C18orf21Q32NC0 220 aaPredicted RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PTPN20Q4JDL3 420 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 FAM106AQ4KMX7 169 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 KLHL12Q53G59 568 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 XKR7Q5GH72 579 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 BEND3Q5T5X7 828 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 HACD4Q5VWC8 232 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 LIPNQ5VXI9 398 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ARMCX5Q6P1M9 558 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 DLEU7Q6UYE1 221 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 NIPA1Q7RTP0 329 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PID1Q7Z2X4 250 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 P4HA3Q7Z4N8 544 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 AMIGO1Q86WK6 493 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PLA2G4DQ86XP0 818 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 RCOR2Q8IZ40 523 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PDIK1LQ8N165 341 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 KIF2BQ8N4N8 673 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 BCORP1Q8N888 145 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 C12orf29Q8N999 325 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 OR52N1Q8NH53 320 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 KCNG3Q8TAE7 436 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 LHFPL5Q8TAF8 219 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 RNASE8Q8TDE3 154 aaKnown RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 FAM172AQ8WUF8 416 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 RIT1Q92963 219 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 EMG1Q92979 244 aaKnown RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 P2RX5Q93086 422 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 BORCS5Q969J3 196 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ST6GALNAC6Q969X2 333 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 CPNE4Q96A23 557 aaPredicted RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ADIPOR1Q96A54 375 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 SLCO4A1Q96BD0 722 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 S100PBPQ96BU1 408 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 AP2M1Q96CW1 435 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 CDKN2AIPNLQ96HQ2 116 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 NEDD4LQ96PU5 975 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 CSPG4P5Q96PW8 444 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PANX1Q96RD7 426 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 TGS1Q96RS0 853 aaKnown RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 NPY6RQ99463 290 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 NAPGQ99747 312 aaPredicted RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PRMT1Q99873 361 aaKnown RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 MAPKAP1Q9BPZ7 522 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 CENPKQ9BS16 269 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 CHRDL1Q9BU40 450 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 TEKT3Q9BXF9 490 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 MRPL13Q9BYD1 178 aaKnown RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ZYG11BQ9C0D3 744 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ROGDIQ9GZN7 287 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 RIMS4Q9H426 269 aaPredicted RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PIGUQ9H490 435 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ACTL8Q9H568 366 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ROPN1Q9HAT0 212 aaPredicted RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 MAGEF1Q9HAY2 307 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 GID8Q9NWU2 228 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 TAS2R1Q9NYW7 299 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 STMN3Q9NZ72 180 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 DHRS4-AS1Q9P1J3 65 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 NUP50Q9UKX7 468 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 KCNK6Q9Y257 313 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 RHBDD3Q9Y3P4 386 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 SF3B1O75533 1304 aaKnown RBP eCLIP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 NUP155O75694 1391 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 RAB3GAP2Q9H2M9 1393 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 BAZ1BQ9UIG0 1483 aaKnown RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 TRAV26-1A0A087WT03 109 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 A0A0J9YVX5 310 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 PVALEFA0A1B0GWK0 134 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF233A6NK53 670 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF729A6NN14 1252 aaPredicted RBP2.82□□□□□ -1.96
PTPRK-220ENST00000531466 ANKRD30BLA7E2S9 258 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 SERPINE3A8MV23 424 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 PRAMEF26H0Y7S4 382 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 WWP2O00308 870 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 ARPC3O15145 178 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 EIF3HO15372 352 aaKnown RBP eCLIP2.82□□□□□ -1.96
PTPRK-220ENST00000531466 TOX3O15405 576 aaPredicted RBP2.82□□□□□ -1.96
PTPRK-220ENST00000531466 FLRT2O43155 660 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 SNX3O60493 162 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 STBD1O95210 358 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 KRT75O95678 551 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 OXSR1O95747 527 aaPredicted RBP2.82□□□□□ -1.96
PTPRK-220ENST00000531466 SEMA4FO95754 770 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 FTH1P02794 183 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 CALB1P05937 261 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 MMP10P09238 476 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 RRASP10301 218 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 HSPD1P10809 573 aaKnown RBP2.82□□□□□ -1.96
PTPRK-220ENST00000531466 CD36P16671 472 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 PSMC3P17980 439 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 C4BPBP20851 252 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 GSTM3P21266 225 aa2.82□□□□□ -1.96
PTPRK-220ENST00000531466 TUBG1P23258 451 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms