RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 GABRPO00591 440 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 SOCS6O14544 535 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 PHYHO14832 338 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CASKO14936 926 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 RGS5O15539 181 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 TBX1O43435 398 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 RNF13O43567 381 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 TRIM3O75382 744 aaPredicted RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 GATBO75879 557 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 ARL6IP5O75915 188 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CDRT1O95170 752 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 UTS2O95399 124 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 DDAH2O95865 285 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CH25HO95992 272 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 HLA-DQB1P01920 261 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CD14P08571 375 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NPIPA8P0DM63 369 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 FUT1P19526 365 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CELP19835 753 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 PGCP20142 388 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 MYL9P24844 172 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 EPHA8P29322 1005 aaPredicted RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 IL12BP29460 328 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 TGFBR1P36897 503 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 RFX3P48380 749 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 TGM4P49221 684 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CSNK1EP49674 416 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 DIO1P49895 249 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 GBX2P52951 348 aaPredicted RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 NRG3P56975 720 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 RPS7P62081 194 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 RPS25P62851 125 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 MAT1AQ00266 395 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 FABP5Q01469 135 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 IFITM3Q01628 133 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 HNRNPA0Q13151 305 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 ASAH1Q13510 395 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 FHL1Q13642 323 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CRMP1Q14194 572 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 MFSD13AQ14CX5 517 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 EBPQ15125 230 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 PON3Q15166 354 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NR0B2Q15466 257 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NSDHLQ15738 373 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 ZNF362Q5T0B9 420 aaPredicted RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 ARHGAP40Q5TG30 622 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 HACD4Q5VWC8 232 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 LYSMD4Q5XG99 296 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 HBMQ6B0K9 141 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 C22orf42Q6IC83 251 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 PAQR6Q6TCH4 344 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 BAIAP2L2Q6UXY1 529 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 LHFPL3Q86UP9 236 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 ZBTB46Q86UZ6 589 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 SLC22A16Q86VW1 577 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 WDR5BQ86VZ2 330 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 GATAD2AQ86YP4 633 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CADM2Q8N3J6 435 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 SIRT6Q8N6T7 355 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 ZNF441Q8N8Z8 693 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 POC5Q8NA72 575 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 FAM98AQ8NCA5 519 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 OR4F15Q8NGB8 312 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 OR4D9Q8NGE8 314 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 OR1N1Q8NGS0 311 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 OR4C3Q8NH37 302 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 OR8K3Q8NH51 312 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 OR51A7Q8NH64 312 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 OR1L3Q8NH93 324 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NEIL3Q8TAT5 605 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NUBPLQ8TB37 319 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 ZNF721Q8TF20 911 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 SPRYD4Q8WW59 207 aaPredicted RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 PTP4A1Q93096 173 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 OTULINQ96BN8 352 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 ZNF501Q96CX3 271 aaPredicted RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 ARSGQ96EG1 525 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CMTM3Q96MX0 182 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 ERMAPQ96PL5 475 aaPredicted RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 TTYH2Q9BSA4 534 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 KATNB1Q9BVA0 655 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 BARHL1Q9BZE3 327 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NMNAT2Q9BZQ4 307 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NXF5Q9H1B4 397 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 ADGRL4Q9HBW9 690 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 MMP25Q9NPA2 562 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 ABCB10Q9NRK6 738 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 FGF21Q9NSA1 209 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 PLEKHB1Q9UF11 243 aaPredicted RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 ZNF229Q9UJW7 825 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NXT1Q9UKK6 140 aaKnown RBP5.07□□□□□ -1.6
PCF11-205ENST00000530906 ITGB1BP2Q9UKP3 347 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 DTX4Q9Y2E6 619 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 CARD8Q9Y2G2 431 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 NPFFR2Q9Y5X5 522 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 TMEM14AQ9Y6G1 99 aa5.07□□□□□ -1.6
PCF11-205ENST00000530906 EML5Q05BV3 1969 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TRAV36DV7A0A075B6V5 113 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TRAV27A0A087WT01 109 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms