RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 RAP2CQ9Y3L5 183 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 LRP5LA4QPB2 252 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 SNUPNO95149 360 aaKnown RBP12.95□□□□□ -0.34
CAPN1-219ENST00000530495 SERPINE1P05121 402 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 TFPTP0C1Z6 253 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 NR2F1P10589 423 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 LBPP18428 481 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 CALCRP30988 508 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 IFFO1Q0D2I5 559 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 BNIP2Q12982 314 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 MAPK11Q15759 364 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 COX20Q5RI15 118 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 WBP2NLQ6ICG8 309 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 VHLLQ6RSH7 139 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 EPHX4Q8IUS5 362 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 PEX5LQ8IYB4 626 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 NEU4Q8WWR8 484 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-219ENST00000530495 TEX37Q96LM6 180 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 DOK1Q99704 481 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 TAPBPLQ9BX59 468 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 ZNF442Q9H7R0 627 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 RASD1Q9Y272 281 aa12.95□□□□□ -0.34
CAPN1-219ENST00000530495 A0A096LPE4 126 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 A0A1W2PPZ6 126 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 WDR91A4D1P6 747 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 VSTM5A8MXK1 200 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 TMEM229AB2RXF0 380 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 BIRC5O15392 142 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 TCF21O43680 179 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 LILRA1O75019 489 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 NPIPB7O75200 414 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 UPK3AO75631 287 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 IGKV3-15P01624 115 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 GKN3PP0CG01 181 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 DAOP14920 347 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 CDKN2CP42773 168 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 CHN2P52757 468 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 HGFACQ04756 655 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 LRRC74AQ0VAA2 488 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 CHI3L2Q15782 390 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 C1orf140Q5VVS0 124 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 OGFOD2Q6N063 350 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 NIPAL3Q6P499 406 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 ZNF621Q6ZSS3 439 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 CADM2Q8N3J6 435 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 ANKK1Q8NFD2 765 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 PKNOX2Q96KN3 472 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 ALKBH3Q96Q83 286 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-219ENST00000530495 SORT1Q99523 831 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 NELFAQ9H3P2 528 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 SEC61A2Q9H9S3 476 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 TMEFF2Q9UIK5 374 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-219ENST00000530495 HAO1Q9UJM8 370 aa12.94□□□□□ -0.34
CAPN1-219ENST00000530495 DSPPQ9NZW4 1301 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 SVEP1Q4LDE5 3571 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 TMEM129A0AVI4 362 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 RPL36A-HNRNPH2H7BZ11 118 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 FRS3O43559 492 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 GSNP06396 782 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 ERCC1P07992 297 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-219ENST00000530495 CBR1P16152 277 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 NPR2P20594 1047 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 IL2RGP31785 369 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 THBS4P35443 961 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 SLC1A6P48664 564 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 SH3BGRP55822 239 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-219ENST00000530495 COPZ1P61923 177 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 UFM1P61960 85 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 TUBA1BP68363 451 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 TUBA4AP68366 448 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 PRAMEF8Q5VWM4 474 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 PRAMEF7Q5VXH5 474 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 UGT2A3Q6UWM9 527 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 ZNF836Q6ZNA1 936 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 TUBA1AQ71U36 451 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 VRK2Q86Y07 508 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 ZCCHC24Q8N2G6 241 aaKnown RBP12.93□□□□□ -0.34
CAPN1-219ENST00000530495 ZNF786Q8N393 782 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 LINC01356Q8N9X3 169 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 OR52P1PQ8NH57 321 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 C1orf159Q96HA4 380 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 ANKRD27Q96NW4 1050 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 OR52E6Q96RD3 313 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 NUF2Q9BZD4 464 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 MEAF6Q9HAF1 191 aa12.93□□□□□ -0.34
CAPN1-219ENST00000530495 A0A096LPI6 279 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 hCG_2039718K7EN88 272 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 ZNF432O94892 652 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 IGFBP1P08833 259 aaPredicted RBP12.92□□□□□ -0.34
CAPN1-219ENST00000530495 ALDOCP09972 364 aaKnown RBP12.92□□□□□ -0.34
CAPN1-219ENST00000530495 APEX1P27695 318 aaKnown RBP12.92□□□□□ -0.34
CAPN1-219ENST00000530495 IL12AP29459 219 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 NME5P56597 212 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 ARF1P84077 181 aaKnown RBP12.92□□□□□ -0.34
CAPN1-219ENST00000530495 ROR2Q01974 943 aaKnown RBP12.92□□□□□ -0.34
CAPN1-219ENST00000530495 RIN1Q13671 783 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 LIN52Q52LA3 116 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 KIRREL3Q8IZU9 778 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 CLIP4Q8N3C7 705 aa12.92□□□□□ -0.34
CAPN1-219ENST00000530495 MFSD8Q8NHS3 518 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms