RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 OR2A2Q6IF42 318 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 SKA3Q8IX90 412 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 NRMQ8IXM6 262 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 FAM83FQ8NEG4 500 aaPredicted RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 ST8SIA1Q92185 356 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 ISG20Q96AZ6 181 aaKnown RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 ZNF414Q96IQ9 312 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 SERAC1Q96JX3 654 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 PGLYRP4Q96LB8 373 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 KLHDC3Q9BQ90 382 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 IQCGQ9H095 443 aaKnown RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 REEP4Q9H6H4 257 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 TDRD3Q9H7E2 651 aaKnown RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 AUNIPQ9H7T9 357 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 PEF1Q9UBV8 284 aaKnown RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 UBQLN1Q9UMX0 589 aaKnown RBP3.31□□□□□ -1.88
C11orf88-204ENST00000529661 NPTNQ9Y639 398 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 COMMD3-BMI1R4GMX3 469 aa3.31□□□□□ -1.88
C11orf88-204ENST00000529661 IGKV1D-8A0A087WSZ0 117 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 A0A0G2JRQ6 117 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 LOC100653049A0A140TA62 436 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 A0A1W2PPE3 182 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 K7N7A8 449 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 DCTN6O00399 190 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 KRT34O76011 436 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 DIRAS1O95057 198 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 IGHV3-48P01763 117 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 IVLP07476 585 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 TROVE2P10155 538 aaKnown RBP eCLIP3.3□□□□□ -1.88
C11orf88-204ENST00000529661 CPN2P22792 545 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 AQP1P29972 269 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 CALCRP30988 508 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 OPRD1P41143 372 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 SSR1P43307 286 aaKnown RBP3.3□□□□□ -1.88
C11orf88-204ENST00000529661 SLC11A1P49279 550 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 BIDP55957 195 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 IGLV3-21P80748 117 aaPredicted RBP3.3□□□□□ -1.88
C11orf88-204ENST00000529661 WDR43Q15061 677 aaKnown RBP eCLIP3.3□□□□□ -1.88
C11orf88-204ENST00000529661 ISXQ2M1V0 245 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 KLHL40Q2TBA0 621 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 KLHL38Q2WGJ6 581 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 NSUN5P1Q3KNT7 163 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 NKAIN1Q4KMZ8 207 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 TFAP2EQ6VUC0 442 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 KDM7AQ6ZMT4 941 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 GDPD3Q7L5L3 318 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 FBXO16Q8IX29 292 aaPredicted RBP3.3□□□□□ -1.88
C11orf88-204ENST00000529661 ALLCQ8N6M5 410 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 OR4C5Q8NGB2 326 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 OR52H1Q8NGJ2 320 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 OR1L4Q8NGR5 311 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 FAM122AQ96E09 287 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 TIMD4Q96H15 378 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 SEC22AQ96IW7 307 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 OXGR1Q96P68 337 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 ROPN1BQ9BZX4 212 aaPredicted RBP3.3□□□□□ -1.88
C11orf88-204ENST00000529661 NMUR2Q9GZQ4 415 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 NHEJ1Q9H9Q4 299 aaPredicted RBP3.3□□□□□ -1.88
C11orf88-204ENST00000529661 TNFRSF19Q9NS68 423 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 TMEM9Q9P0T7 183 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 CLEC4EQ9ULY5 219 aa3.3□□□□□ -1.88
C11orf88-204ENST00000529661 PLEKHH1Q9ULM0 1364 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 SH3TC1Q8TE82 1336 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 KLF18A0A0U1RQI7 1052 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 A0A1W2PNU3 283 aaPredicted RBP3.29□□□□□ -1.88
C11orf88-204ENST00000529661 TCRBV9S1A1TA0A576 114 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 GOLGA8SH3BPF8 625 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 HSD17B6O14756 317 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 RGS16O15492 202 aaPredicted RBP3.29□□□□□ -1.88
C11orf88-204ENST00000529661 HCRTR1O43613 425 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 DNAJB6O75190 326 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 CDH16O75309 829 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 UPK3AO75631 287 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 FLOT1O75955 427 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 HSPB1P04792 205 aaKnown RBP3.29□□□□□ -1.88
C11orf88-204ENST00000529661 CRYGBP07316 175 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 OR8G3PP0DMU2 310 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 NPR2P20594 1047 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 ANXA13P27216 316 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 NTSP30990 170 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 EPS15P42566 896 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 DIO3P55073 304 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 OXA1LQ15070 435 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 DUSP7Q16829 419 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 CARD16Q5EG05 197 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 GPRC6AQ5T6X5 926 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 PIP5KL1Q5T9C9 394 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 RAET1LQ5VY80 246 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 UNQ9370/PRO34162Q6UXP9 181 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 H2BFWTQ7Z2G1 175 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 CCDC65Q8IXS2 484 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 BPIFCQ8NFQ6 507 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 KCNG3Q8TAE7 436 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 FAM110BQ8TC76 370 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 SETD7Q8WTS6 366 aaKnown RBP3.29□□□□□ -1.88
C11orf88-204ENST00000529661 NEIL2Q969S2 332 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 LRRC39Q96DD0 335 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 PAGE5Q96GU1 130 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 KCNA7Q96RP8 456 aa3.29□□□□□ -1.88
C11orf88-204ENST00000529661 CLCC1Q96S66 551 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms