RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 HSPB2A8KAH6 182 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 M0R082 166 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 EIF1BO60739 113 aaKnown RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 CYTIPO60759 359 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 FZD7O75084 574 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 FKBP6O75344 327 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 GADD45GO95257 159 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 CH25HO95992 272 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 LDLRP01130 860 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 NQO1P15559 274 aaKnown RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 GTF2E2P29084 291 aaKnown RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 GRPRP30550 384 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 KPNB1Q14974 876 aaKnown RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 HSPB2Q16082 182 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 ZNF74Q16587 644 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 OTUD3Q5T2D3 398 aaPredicted RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 ABLIM2Q6H8Q1 611 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 OR2A2Q6IF42 318 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 PAQR6Q6TCH4 344 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 ZNF730Q6ZMV8 503 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 MEX3DQ86XN8 651 aaKnown RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 MCEMP1Q8IX19 187 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 NRMQ8IXM6 262 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 ZNF417Q8TAU3 575 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 ACOT11Q8WXI4 607 aaPredicted RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 SDCCAG3Q96C92 435 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 RAB3IPQ96QF0 476 aaPredicted RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 ZNF587Q96SQ5 575 aaPredicted RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 NAA11Q9BSU3 229 aaPredicted RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 FUZQ9BT04 418 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 CCM2LQ9NUG4 571 aaPredicted RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 A0A1W2PNV4 684 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 AQP7P3A6NL99 342 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 PLGP00747 810 aaPredicted RBP12.48□□□□□ -0.41
USF1-209ENST00000529476 IFI30P13284 250 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 CTSSP25774 331 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 P2RY4P51582 365 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 SMSP52788 366 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 SMIM11AP58511 58 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 SIRPAP78324 504 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 RASGEF1BQ0VAM2 473 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 RNPS1Q15287 305 aaKnown RBP12.48□□□□□ -0.41
USF1-209ENST00000529476 SEC23BQ15437 767 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 GUSBP1Q15486 140 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 CDSNQ15517 529 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 OR2T5Q6IEZ7 315 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 MBOAT2Q6ZWT7 520 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 MAMDC2Q7Z304 686 aaPredicted RBP12.48□□□□□ -0.41
USF1-209ENST00000529476 SLC46A3Q7Z3Q1 461 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 MRGPRGQ86SM5 289 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 SLC43A2Q8N370 569 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 LRRC17Q8N6Y2 441 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 CNEP1R1Q8N9A8 125 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 PAPD5Q8NDF8 572 aaKnown RBP12.48□□□□□ -0.41
USF1-209ENST00000529476 OR2T29Q8NH02 315 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 PIGXQ8TBF5 258 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 ITLN2Q8WWU7 325 aaPredicted RBP12.48□□□□□ -0.41
USF1-209ENST00000529476 SGTBQ96EQ0 304 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 ZFP3Q96NJ6 502 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 PSD2Q9BQI7 771 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 KLHL4Q9C0H6 718 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 VNN3Q9NY84 501 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 COQ3Q9NZJ6 369 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 C6orf203Q9P0P8 240 aaPredicted RBP12.48□□□□□ -0.41
USF1-209ENST00000529476 ING1Q9UK53 422 aaPredicted RBP12.48□□□□□ -0.41
USF1-209ENST00000529476 CELSR2Q9HCU4 2923 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 CENPEQ02224 2701 aa12.48□□□□□ -0.41
USF1-209ENST00000529476 ZNF716A6NP11 495 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 ANKRD65E5RJM6 399 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 SS18L1O75177 396 aaPredicted RBP12.47□□□□□ -0.41
USF1-209ENST00000529476 TNFSF13O75888 250 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 OR7A10O76100 309 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 MT-ATP6P00846 226 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 BMP5P22003 454 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 CHRNB4P30926 498 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 KIR2DL2P43627 348 aaPredicted RBP12.47□□□□□ -0.41
USF1-209ENST00000529476 ACTR3P61158 418 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 PRKCDQ05655 676 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 PPP1R8Q12972 351 aaKnown RBP12.47□□□□□ -0.41
USF1-209ENST00000529476 MFSD13AQ14CX5 517 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 EXOC3L2Q2M3D2 409 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 H1FNTQ75WM6 255 aaPredicted RBP12.47□□□□□ -0.41
USF1-209ENST00000529476 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 TUSC5Q8IXB3 177 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 RNF113BQ8IZP6 322 aaKnown RBP12.47□□□□□ -0.41
USF1-209ENST00000529476 KDM8Q8N371 416 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 OR4K5Q8NGD3 323 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 ZNF775Q96BV0 537 aaPredicted RBP12.47□□□□□ -0.41
USF1-209ENST00000529476 BPIFA2Q96DR5 249 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
USF1-209ENST00000529476 ALPK1Q96QP1 1244 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 ASPNQ9BXN1 380 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 DENND2DQ9H6A0 471 aaPredicted RBP12.47□□□□□ -0.41
USF1-209ENST00000529476 FKRPQ9H9S5 495 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 CHST11Q9NPF2 352 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 NANSQ9NR45 359 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 GLRX2Q9NS18 164 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 KLHL9Q9P2J3 617 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms