RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 CIB4A0PJX0 185 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 CXCR6O00574 342 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 NME4O00746 187 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 CHP2O43745 196 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 LYZL6O75951 148 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 ZNF682O95780 498 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 PTNP21246 168 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 CBLP22681 906 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 CRYGSP22914 178 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 GRPRP30550 384 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 MNAT1P51948 309 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 TAS2R41P59536 307 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 TSC22D1Q15714 1073 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 STK11Q15831 433 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 SFRP5Q5T4F7 317 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 TTC33Q6PID6 262 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-209ENST00000527469 AAED1Q7RTV5 226 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 CDC20BQ86Y33 519 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 RBM45Q8IUH3 476 aaKnown RBP11.85□□□□□ -0.51
CAPN1-209ENST00000527469 ADAMTS16Q8TE57 1224 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 TAAR8Q969N4 342 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 FAM162AQ96A26 154 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 WFDC6Q9BQY6 131 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 TMEM43Q9BTV4 400 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 OR10A4Q9H209 315 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 ITGB1BP2Q9UKP3 347 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 SLC7A7Q9UM01 511 aa11.85□□□□□ -0.51
CAPN1-209ENST00000527469 IGKV1D-42A0A075B6H8 117 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 M0R082 166 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 AKAP8O43823 692 aaKnown RBP11.84□□□□□ -0.51
CAPN1-209ENST00000527469 TPST2O60704 377 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 OR6A2O95222 327 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 ZNF43P17038 809 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 GGT1P19440 569 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 DNAJA1P31689 397 aaKnown RBP11.84□□□□□ -0.51
CAPN1-209ENST00000527469 GSK3BP49841 420 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 EGR4Q05215 589 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 FAPQ12884 760 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 NPTX1Q15818 432 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 BEX5Q5H9J7 111 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 H1FNTQ75WM6 255 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-209ENST00000527469 ABHD12BQ7Z5M8 362 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-209ENST00000527469 ANKS4BQ8N8V4 417 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 CCDC197Q8NCU1 140 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 ZNF417Q8TAU3 575 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 HSD17B8Q92506 261 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 TMEM45BQ96B21 275 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 MUCL1Q96DR8 90 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 SLC41A3Q96GZ6 507 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 MPP4Q96JB8 637 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 ZNF587Q96SQ5 575 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-209ENST00000527469 PTDSS2Q9BVG9 487 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 NDE1Q9NXR1 346 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 TAGLN3Q9UI15 199 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 B3GALT5Q9Y2C3 310 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 CORINQ9Y5Q5 1042 aa11.84□□□□□ -0.51
CAPN1-209ENST00000527469 OR6C65A6NJZ3 312 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 ENO4A6NNW6 628 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 FTCDNL1E5RQL4 147 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 KPNA4O00629 521 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-209ENST00000527469 SHOX2O60902 331 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-209ENST00000527469 FAM107AO95990 144 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 MT-ATP6P00846 226 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 HRGP04196 525 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 HIST1H2ABP04908 130 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 IFNW1P05000 195 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 TNFRSF1BP20333 461 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 DNASE1P24855 282 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 HOXC12P31275 282 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 OR1E2P47887 323 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 CRYBA2P53672 197 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 NR1H2P55055 460 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 TGFBR3Q03167 851 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 FOXD4Q12950 439 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-209ENST00000527469 PMS2P3Q13401 168 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 FKBP9P1Q75LS8 142 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 HIST3H2AQ7L7L0 130 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 SSX8Q7RTT4 187 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 POMGNT2Q8NAT1 580 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 OR4D11Q8NGI4 311 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 OR6S1Q8NH40 331 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 HIST1H2ACQ93077 130 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 POLR2J2Q9GZM3 115 aaKnown RBP11.83□□□□□ -0.52
CAPN1-209ENST00000527469 PCDHAC1Q9H158 963 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 POLR2J3Q9H1A7 115 aaKnown RBP11.83□□□□□ -0.52
CAPN1-209ENST00000527469 SLCO5A1Q9H2Y9 848 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 FREM1Q5H8C1 2179 aa11.83□□□□□ -0.52
CAPN1-209ENST00000527469 HRNRQ86YZ3 2850 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-209ENST00000527469 PDZD2O15018 2839 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 FAM221AA4D161 298 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 ZNF587BE7ETH6 402 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 RAD51DO75771 328 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 OR5F1O95221 314 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 SERPINA1P01009 418 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 UMPSP11172 480 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 IGHV1-2P23083 117 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 EDNRAP25101 427 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 CLDN17P56750 224 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 SELENOWP63302 87 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 KEAP1Q14145 624 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms