RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 HRH3Q9Y5N1 445 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 H7C1C5 153 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 DOK2O60496 412 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 CREBL2O60519 120 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 STX11O75558 287 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 RPN2P04844 631 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 OR8G3PP0DMU2 310 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 DPP4P27487 766 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 LCN6P62502 163 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 SORDQ00796 357 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 DPTQ07507 201 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 RUNX2Q13950 521 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 FAM53BQ14153 422 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 ATXN7L3Q14CW9 347 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 HNRNPA1L2Q32P51 320 aaKnown RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 SLC6A19Q695T7 634 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 C11orf88Q6PI97 169 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 VN1R4Q7Z5H5 301 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 NRROSQ86YC3 692 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 C12orf76Q8N812 135 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 MS4A4EQ96PG1 132 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 SYNDIG1Q9H7V2 258 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 CT62P0C5K7 136 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 ITPKBP27987 946 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 EFNB2P52799 333 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 SEC61A1P61619 476 aaKnown RBP12.08□□□□□ -0.48
CAPN1-202ENST00000524773 TRA2BP62995 288 aaKnown RBP12.08□□□□□ -0.48
CAPN1-202ENST00000524773 ERVK-25P63136 954 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 DYRK1AQ13627 763 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 ELP2Q6IA86 826 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 CMIPQ8IY22 773 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 OR51A4Q8NGJ6 313 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 PCBD2Q9H0N5 130 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 SLC6A17Q9H1V8 727 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 EXOSC3Q9NQT5 275 aaKnown RBP12.08□□□□□ -0.48
CAPN1-202ENST00000524773 PTTG3PQ9NZH4 202 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 CALML5Q9NZT1 146 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 NCDNQ9UBB6 729 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 DPP7Q9UHL4 492 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 FOXJ3Q9UPW0 622 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 A0A1B0GWA3 101 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 GALR3O60755 368 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-202ENST00000524773 ARL6IP5O75915 188 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 TGM6O95932 706 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 ADRA2CP18825 462 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 S100A11P31949 105 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 PCGF3Q3KNV8 242 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 GLB1L2Q8IW92 636 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 OR1S1Q8NH92 325 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 ADAT1Q9BUB4 502 aaKnown RBP12.08□□□□□ -0.48
CAPN1-202ENST00000524773 ACTR6Q9GZN1 396 aa12.08□□□□□ -0.48
CAPN1-202ENST00000524773 A0A1B0GUH1 482 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 OR6C68A6NDL8 312 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 TBC1D3BA6NDS4 549 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 RP2O75695 350 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 PGDP52209 483 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 PPP2CBP62714 309 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 PPP2CAP67775 309 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 FHL1Q13642 323 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 ETFDHQ16134 617 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 TMEM35AQ53FP2 167 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 PWWP2BQ6NUJ5 590 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 DGAT2L6Q6ZPD8 337 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 TMPRSS12Q86WS5 348 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 MUC20Q8N307 709 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-202ENST00000524773 KRCC1Q9NPI7 259 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-202ENST00000524773 PFDN2Q9UHV9 154 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 MRTO4Q9UKD2 239 aaKnown RBP12.07□□□□□ -0.48
CAPN1-202ENST00000524773 KLHDC2Q9Y2U9 406 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 TRAV1-2A0A0B4J238 106 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 OR2M5A3KFT3 312 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 TVP23AA6NH52 213 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 PTP4A3O75365 173 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 TPMTP51580 245 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 IRF4Q15306 451 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 ARHGAP11BQ3KRB8 267 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 B3GNTL1Q67FW5 361 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-202ENST00000524773 CNN2Q99439 309 aaKnown RBP12.07□□□□□ -0.48
CAPN1-202ENST00000524773 ZCCHC4Q9H5U6 513 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 ZMAT3Q9HA38 289 aaKnown RBP12.07□□□□□ -0.48
CAPN1-202ENST00000524773 CD93Q9NPY3 652 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 KIF25Q9UIL4 384 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 LTBP2Q14767 1821 aa12.07□□□□□ -0.48
CAPN1-202ENST00000524773 LOC100509620A0A075B734 347 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TMEM272A0A1B0GTI8 110 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 GABARAPH6UMI1 98 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 GSTZ1O43708 216 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-202ENST00000524773 ADH1AP07327 375 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 PVRP15151 417 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TAS2R43P59537 309 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 ELAVL3Q14576 367 aaKnown RBP12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TMEM88Q6PEY1 159 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 GATSQ8NAP1 163 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 OR4K14Q8NGD5 310 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 OR10G6Q8NH81 332 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 CCL4L1Q8NHW4 92 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 EVA1AQ9H8M9 152 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 SESN1Q9Y6P5 492 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TRAV8-7A0A075B6U6 113 aa12.06□□□□□ -0.48
CAPN1-202ENST00000524773 TBC1D3EA0A087X179 549 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms