RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 BUD31P41223 144 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-224ENST00000524126 CXADRP78310 365 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 PCGF3Q3KNV8 242 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 LIPJQ5W064 366 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 TMEM173Q86WV6 379 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-224ENST00000524126 PPP1R3BQ86XI6 285 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 ZNF433Q8N7K0 673 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-224ENST00000524126 STEAP2Q8NFT2 490 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 SYNPRQ8TBG9 265 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 RGP1Q92546 391 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-224ENST00000524126 PHYHIPLQ96FC7 376 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 NDC1Q9BTX1 674 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 ZCCHC2Q9C0B9 1178 aaKnown RBP9.38□□□□□ -0.91
SPIDR-224ENST00000524126 SMOC1Q9H4F8 434 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 TMEM27Q9HBJ8 222 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 GFOD1Q9NXC2 390 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 PPP4R1LQ9P1A2 415 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 FBXO4Q9UKT5 387 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 NTNG1Q9Y2I2 539 aa9.38□□□□□ -0.91
SPIDR-224ENST00000524126 CPSF4LA6NMK7 179 aaKnown RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 NPIPB9F8W1W9 429 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 HMGN4O00479 90 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 AGPAT2O15120 278 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 PPP1R3DO95685 299 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 CD79AP11912 226 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 CCL5P13501 91 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 AGTR1P30556 359 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 CASRP41180 1078 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 ATP1B3P54709 279 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 RPS24P62847 133 aaKnown RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 PLA2G7Q13093 441 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 SURF2Q15527 256 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 HYAL4Q2M3T9 481 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 MST1LQ2TV78 715 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 YOD1Q5VVQ6 348 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 CLEC9AQ6UXN8 241 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 TMED6Q8WW62 240 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 ASB11Q8WXH4 323 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 DVL3Q92997 716 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 PPP1R16AQ96I34 528 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 UNKLQ9H9P5 680 aaKnown RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 A4GALTQ9NPC4 353 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 TAAR2Q9P1P5 351 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 A0A087X0M5 115 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 A0A1B0GX30 115 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 TMEM72A0PK05 275 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 OR2F2O95006 317 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 KLK1P06870 262 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 SNRNP70P08621 437 aaKnown RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 ALPPL2P10696 532 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 FUT1P19526 365 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 TACR2P21452 398 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 CERS1P27544 350 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 OR1G1P47890 313 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 MNX1P50219 401 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 PNLIPRP1P54315 467 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 ILF3Q12906 894 aaKnown RBP eCLIP9.37□□□□□ -0.912e-6■■■■□ 21.1
SPIDR-224ENST00000524126 HSPB3Q12988 150 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 TSPAN31Q12999 210 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 OR2F1Q13607 317 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 GAMTQ14353 236 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 MPPED2Q15777 294 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 CCSMST1Q4G0I0 132 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 OR10K2Q6IF99 312 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 C11orf87Q6NUJ2 197 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 ADCK2Q7Z695 626 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 C11orf96Q7Z7L8 435 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 PARGQ86W56 976 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 THEM5Q8N1Q8 247 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 TTC9BQ8N6N2 239 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 OSTF1Q92882 214 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 NEIL2Q969S2 332 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 RAB3CQ96E17 227 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 SAMD8Q96LT4 415 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 OCSTAMPQ9BR26 566 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 C20orf24Q9BUV8 137 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 SYNPO2LQ9H987 977 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 RHOFQ9HBH0 211 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 WSB2Q9NYS7 404 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-224ENST00000524126 VWA8A3KMH1 1905 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 PLXND1Q9Y4D7 1925 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 REV3LO60673 3130 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 PDE4DIPQ5VU43 2346 aa9.37□□□□□ -0.91
SPIDR-224ENST00000524126 MT-ND4LP03901 98 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 HEXBP07686 556 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 LIPCP11150 499 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 RAB5AP20339 215 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 NT5EP21589 574 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 DPP4P27487 766 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 DDTP30046 118 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 PTGER1P34995 402 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 ST8SIA6P61647 398 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 PPP2CBP62714 309 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 PPP2CAP67775 309 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 B4GALNT1Q00973 533 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 TSTA3Q13630 321 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-224ENST00000524126 PDE7AQ13946 482 aa9.36□□□□□ -0.91
SPIDR-224ENST00000524126 TP53I3Q53FA7 332 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms