RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FXNQ16595 210 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 UNC50Q53HI1 259 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 FAM71CQ8NEG0 241 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 ZNF563Q8TA94 476 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 ADAMTS15Q8TE58 950 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 RAB1CQ92928 201 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 MRRFQ96E11 262 aaKnown RBP11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 TIMD4Q96H15 378 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 MS4A3Q96HJ5 214 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 GAL3ST1Q99999 423 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 GATA5Q9BWX5 397 aaPredicted RBP11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 ACTRT3Q9BYD9 372 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 RASSF4Q9H2L5 321 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 TCF7L1Q9HCS4 588 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 DUSP13Q9UII6 198 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 PCDHGB4Q9UN71 923 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 RNF114Q9Y508 228 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 NOX1Q9Y5S8 564 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 CACNG2Q9Y698 323 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 BIRC6Q9NR09 4857 aa11.76□□□□□ -0.53
NKX3-1-202ENST00000523261 A0A1W2PPW3 197 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 C5orf63A6NC05 138 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 C17orf100A8MU93 164 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 TRAPPC2LH3BP13 241 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 TBX19O60806 448 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 BCAS1O75363 584 aaPredicted RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 SUPT7LO94864 414 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 AKR7A3O95154 331 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 ENO1P06733 434 aaKnown RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 IGHV4-38-2P0DP08 117 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 ZNF12P17014 697 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 STX2P32856 288 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 RPS23P62266 143 aaKnown RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 TEKQ02763 1124 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 C2orf68Q2NKX9 166 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 GLIPR1L2Q4G1C9 344 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 RUSC1-AS1Q66K80 236 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 EIF3MQ7L2H7 374 aaKnown RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 GPAT4Q86UL3 456 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 TMEM151AQ8N4L1 468 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 NOA1Q8NC60 698 aaKnown RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 ST7LQ8TDW4 575 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 PPCDCQ96CD2 204 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 TRIM44Q96DX7 344 aaPredicted RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 SDF2Q99470 211 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 MRPL57Q9BQC6 102 aaKnown RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 LINC00470Q9BZP3 86 aa11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 MRPL46Q9H2W6 279 aaKnown RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 POLR3KQ9Y2Y1 108 aaPredicted RBP11.75□□□□□ -0.53
NKX3-1-202ENST00000523261 DNAH3Q8TD57 4116 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 IGHV3OR16-10A0A075B7F0 116 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 TMED7-TICAM2A0A0A6YYA0 188 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 TMEM72A0PK05 275 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 ZC3H12DA2A288 527 aaKnown RBP11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 AQP7P3A6NL99 342 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 RPL36A-HNRNPH2H7BZ11 118 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 SHOX2O60902 331 aaPredicted RBP11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 UGT2B17O75795 530 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 ZNF432O94892 652 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 RYKP34925 604 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 PGM1P36871 562 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 MAGEA12P43365 314 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 PROK1P58294 105 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 PDE7AQ13946 482 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 PDCD1Q15116 288 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 GPR68Q15743 365 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 NKPD1Q17RQ9 610 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 PCGF3Q3KNV8 242 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 ZNF678Q5SXM1 525 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 NIPAL3Q6P499 406 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 EMBQ6PCB8 327 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 USP51Q70EK9 711 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 CREB3L2Q70SY1 520 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 PARP8Q8N3A8 854 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 ANKK1Q8NFD2 765 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 BHLHE22Q8NFJ8 381 aaPredicted RBP11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 PMM1Q92871 262 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 PRDM13Q9H4Q3 707 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 REEP4Q9H6H4 257 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 HINT3Q9NQE9 182 aaKnown RBP11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 GPATCH2Q9NW75 528 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 B3GNT2Q9NY97 397 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 NKIRAS2Q9NYR9 191 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 UBAP1Q9NZ09 502 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 SH3BP4Q9P0V3 963 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 ASH2LQ9UBL3 628 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 SEC14L4Q9UDX3 406 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 TMED7Q9Y3B3 224 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 INSIG2Q9Y5U4 225 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 DSPPQ9NZW4 1301 aa11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 EPPK1P58107 5090 aaKnown RBP11.74□□□□□ -0.53
NKX3-1-202ENST00000523261 SRRM5B3KS81 715 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 ZNF208O43345 1280 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 AKAP10O43572 662 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 PLATP00750 562 aa11.73□□□□□ -0.53
NKX3-1-202ENST00000523261 IGHMP01871 453 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms