RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SLC25A3Q00325 362 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 DMTNQ08495 405 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 ELOA3BQ3SY89 546 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 C6orf89Q6UWU4 347 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 DHDDSQ86SQ9 333 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 DPP10Q8N608 796 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 ELOA3Q8NG57 546 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 TAAR8Q969N4 342 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 ANKRD27Q96NW4 1050 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 CGREF1Q99674 301 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 BDH2Q9BUT1 245 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 SPATA5L1Q9BVQ7 753 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 SLC17A5Q9NRA2 495 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 CORO2BQ9UQ03 480 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 ZFHX3Q15911 3703 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 M0R1B8 84 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 MFN2O95140 757 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 PNMTP11086 282 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 CD40P25942 277 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 MPGP29372 298 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 MTPNP58546 118 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 SF3A3Q12874 501 aaKnown RBP eCLIP16.39■□□□□ 0.21
SPIDR-220ENST00000522900 TMEM108Q6UXF1 575 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 CLEC9AQ6UXN8 241 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 LINGO2Q7L985 606 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 PIAS4Q8N2W9 510 aaPredicted RBP16.39■□□□□ 0.21
SPIDR-220ENST00000522900 HIPK4Q8NE63 616 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 ZNF607Q96SK3 696 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 SLCO5A1Q9H2Y9 848 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 PIF1Q9H611 641 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 TRIM33Q9UPN9 1127 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 RASD1Q9Y272 281 aa16.39■□□□□ 0.21
SPIDR-220ENST00000522900 ARID1AO14497 2285 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 E7EQL1 145 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 VAMP5O95183 116 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 CBLP22681 906 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 CDH11P55287 796 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 LTBQ06643 244 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 ALG10BQ5I7T1 473 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 SSX8Q7RTT4 187 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 ARMC8Q8IUR7 673 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 SMYD1Q8NB12 490 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 TRAF4Q9BUZ4 470 aaPredicted RBP16.38■□□□□ 0.21
SPIDR-220ENST00000522900 C12orf10Q9HB07 376 aa16.38■□□□□ 0.21
SPIDR-220ENST00000522900 PRORSD1PA6NEY8 169 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 FBP2O00757 339 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 ANGPT2O15123 496 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 NDUFS7O75251 213 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 UPK3AO75631 287 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 SERPINB7O75635 380 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 PTAFRP25105 342 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 PCBP3P57721 371 aaKnown RBP16.37■□□□□ 0.21
SPIDR-220ENST00000522900 TNK1Q13470 666 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 NFYCQ13952 458 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 OR1Q1Q15612 314 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 HIKESHIQ53FT3 197 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 METTL21CQ5VZV1 264 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 NIPAL3Q6P499 406 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 ULK3Q6PHR2 472 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 KLHL17Q6TDP4 642 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 B3GLCTQ6Y288 498 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 POMGNT2Q8NAT1 580 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 C1orf162Q8NEQ5 155 aaPredicted RBP16.37■□□□□ 0.21
SPIDR-220ENST00000522900 RNF217Q8TC41 542 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 DNAJA4Q8WW22 397 aaPredicted RBP16.37■□□□□ 0.21
SPIDR-220ENST00000522900 SLC38A4Q969I6 547 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 GTPBP3Q969Y2 492 aaKnown RBP16.37■□□□□ 0.21
SPIDR-220ENST00000522900 TMEM120AQ9BXJ8 343 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 ZNF446Q9NWS9 450 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 B3GAT1Q9P2W7 334 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 ANGPT4Q9Y264 503 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 USF3Q68DE3 2245 aa16.37■□□□□ 0.21
SPIDR-220ENST00000522900 M0QX08 132 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 M0R082 166 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 M0R3H8 397 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 FZD7O75084 574 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 KRT33AO76009 404 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 LGI1O95970 557 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 OPN1SWP03999 348 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 GRPRP30550 384 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 CLDN17P56750 224 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 RGS8P57771 180 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-220ENST00000522900 TGFBR3Q03167 851 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 DUSP7Q16829 419 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 CYP51A1Q16850 503 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 SLC22A25Q6T423 547 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 DTX2Q86UW9 622 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 C17orf78Q8N4C9 275 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 C11orf65Q8NCR3 313 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 GPR32P1Q8NGA4 272 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 ZNF417Q8TAU3 575 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 TSPEARQ8WU66 669 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 SLC47A1Q96FL8 570 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 TRMT61AQ96FX7 289 aaKnown RBP16.36■□□□□ 0.21
SPIDR-220ENST00000522900 RADILQ96JH8 1075 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 ZNF587Q96SQ5 575 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-220ENST00000522900 SIKE1Q9BRV8 207 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 KAT8Q9H7Z6 458 aaKnown RBP16.36■□□□□ 0.21
SPIDR-220ENST00000522900 TMEM27Q9HBJ8 222 aa16.36■□□□□ 0.21
SPIDR-220ENST00000522900 KLHL14Q9P2G3 628 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms