RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 HNRNPCL3B7ZW38 293 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 C5orf58C9J3I9 102 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 CLIC1O00299 241 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 HNRNPCL1O60812 293 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 HNRNPCL4P0DMR1 293 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 RPS4Y1P22090 263 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 PTAFRP25105 342 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 ACAA2P42765 397 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 MVDP53602 400 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 STX1BP61266 288 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 IL1RL1Q01638 556 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 TGFBR3Q03167 851 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 LGALS3BPQ08380 585 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 SLC17A1Q14916 467 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 RAB35Q15286 201 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 HIKESHIQ53FT3 197 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 PAQR6Q6TCH4 344 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 KLHL24Q6TFL4 600 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 SERPINA11Q86U17 422 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 PRIMA1Q86XR5 153 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 KDM8Q8N371 416 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 ZIC4Q8N9L1 334 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 WDR31Q8NA23 367 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 RNF166Q96A37 237 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 ADAD1Q96M93 576 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 ZNF385AQ96PM9 386 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 DHRS9Q9BPW9 319 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 RHNO1Q9BSD3 238 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 CACNG6Q9BXT2 260 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 ARMC7Q9H6L4 198 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 SDR39U1Q9NRG7 319 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 YAE1D1Q9NRH1 226 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 RPS6KB2Q9UBS0 482 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 MGAT4BQ9UQ53 548 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 PCDHB14Q9Y5E9 798 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 ATRQ13535 2644 aa8.99□□□□□ -0.97
CTNNA1-235ENST00000522730 A8MVM7 634 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 NR5A2O00482 541 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 FAAHO00519 579 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 ZCCHC18P0CG32 403 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 CBLP22681 906 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 TTKP33981 857 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 RPS5P46782 204 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 MAP2K6P52564 334 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 NUDT6P53370 316 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 PRPS1P60891 318 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 IRX1P78414 480 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 GABPB1Q06547 395 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 RGNQ15493 299 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 ETFDHQ16134 617 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 C1orf140Q5VVS0 124 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 PRAMEF8Q5VWM4 474 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 PRAMEF7Q5VXH5 474 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 METTL21CQ5VZV1 264 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 B3GLCTQ6Y288 498 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 SSX8Q7RTT4 187 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 MUC15Q8N387 334 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 ANKS4BQ8N8V4 417 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 GTF2H4Q92759 462 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 SPATA9Q9BWV2 254 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 PAIP1Q9H074 479 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 BARX1Q9HBU1 254 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 SLC17A5Q9NRA2 495 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 TMEM45AQ9NWC5 275 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 MALT1Q9UDY8 824 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 IFT52Q9Y366 437 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 COL6A5A8TX70 2615 aa8.98□□□□□ -0.97
CTNNA1-235ENST00000522730 DNHD1Q96M86 4753 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 A0A096LPE4 126 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 AQP7P3A6NL99 342 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 ELOA3DA6NLF2 546 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 AHSA1O95433 338 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 LGI1O95970 557 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 THBS1P07996 1170 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 GTF2E2P29084 291 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 MPGP29372 298 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 SELENOPP49908 381 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 TUBA1BP68363 451 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 TUBA4AP68366 448 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 SLC25A3Q00325 362 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 DMTNQ08495 405 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 ELOA3BQ3SY89 546 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 NIPAL3Q6P499 406 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 MSANTD1Q6ZTZ1 278 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 CREB3L2Q70SY1 520 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 TUBA1AQ71U36 451 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 POMGNT2Q8NAT1 580 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 ELOA3Q8NG57 546 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 NFKBIDQ8NI38 313 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 FBXO17Q96EF6 278 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 SF3B5Q9BWJ5 86 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 RAD21L1Q9H4I0 556 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 FKRPQ9H9S5 495 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 CBLN4Q9NTU7 201 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 THUMPD1Q9NXG2 353 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 CCDC167Q9P0B6 97 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 SLAMF8Q9P0V8 285 aa8.97□□□□□ -0.97
CTNNA1-235ENST00000522730 TRIM33Q9UPN9 1127 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms