RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 GNB1P62873 340 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 TRA2BP62995 288 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 MAT1AQ00266 395 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 HMGCS1Q01581 520 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 EMX2Q04743 252 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 GAGE2BQ13066 116 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 KIAA0040Q15053 153 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 TGIF1Q15583 401 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 IMPG1Q17R60 797 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SMU1Q2TAY7 513 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 GAGE2EQ4V326 116 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SPIN4Q56A73 249 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 XKR7Q5GH72 579 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 C6orf136Q5SQH8 315 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 FAM219BQ5XKK7 198 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 GAGE2AQ6NT46 116 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SLC30A6Q6NXT4 461 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 FAM199XQ6PEV8 388 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 FAM198BQ6UWH4 519 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 Q6ZSR9 355 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 Q75L30 129 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PRSS41Q7RTY9 318 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PAGE2Q7Z2X7 111 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 COMMD6Q7Z4G1 85 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SPATA19Q7Z5L4 167 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 NUDT13Q86X67 352 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 CRLF3Q8IUI8 442 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF595Q8IYB9 648 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 CA13Q8N1Q1 262 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 POMGNT2Q8NAT1 580 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PLPP5Q8NEB5 264 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 OR5T3Q8NGG3 340 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 OR2Y1Q8NGV0 311 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 OR2T11Q8NH01 316 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 OR51Q1Q8NH59 317 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 AGR3Q8TD06 166 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 KCNE4Q8WWG9 221 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 KIAA1143Q96AT1 154 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 TM4SF18Q96CE8 201 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 C11orf24Q96F05 449 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SLC45A3Q96JT2 553 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 FCRL1Q96LA6 429 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 CCNL2Q96S94 520 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 HBEGFQ99075 208 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF717Q9BY31 904 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 MRPL1Q9BYD6 325 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 KLHL4Q9C0H6 718 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SLC26A1Q9H2B4 701 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 DENND2DQ9H6A0 471 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 WDR54Q9H977 334 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 COPS7BQ9H9Q2 264 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 LRTM1Q9HBL6 345 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SLCO1B3Q9NPD5 702 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SLC35C2Q9NQQ7 365 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 C14orf105Q9NVL8 296 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 C1orf109Q9NX04 203 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 LYARQ9NX58 379 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 MS4A12Q9NXJ0 267 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RCC2Q9P258 522 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF282Q9UDV7 671 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 GAGE2DQ9UEU5 116 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 IL17BQ9UHF5 180 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PHF11Q9UIL8 331 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 NXT1Q9UKK6 140 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PPIEQ9UNP9 301 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PADI2Q9Y2J8 665 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 FIS1Q9Y3D6 152 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 MMACHCQ9Y4U1 282 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 ASB4Q9Y574 426 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 USH1CQ9Y6N9 552 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SPACA6W5XKT8 324 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 GVINP1Q7Z2Y8 2422 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 LRP4O75096 1905 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 CABIN1Q9Y6J0 2220 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 FAM186AA6NE01 2351 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RIF1Q5UIP0 2472 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ASCC3Q8N3C0 2202 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 CEP192Q8TEP8 1941 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 A0A087WV48 116 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 LOC102723996A0A087X1L8 192 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 IGKV3D-20A0A0C4DH25 116 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ATP6AP2A0A1C7CYW4 349 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 hCG_1809904A0A1W2PP81 198 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 A0A1W2PPE2 198 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 GNG14A0A1W2PPG7 69 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 A0A1W2PR64 198 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 GLOD5A6NK44 160 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 DUXAA6NLW8 204 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 J3QR06 171 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 PSMD12O00232 456 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 NR5A2O00482 541 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 SDHDO14521 159 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 LSM1O15116 133 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 POLR3GO15318 223 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 EDF1O60869 148 aaKnown RBP2.84□□□□□ -1.95
VPS13B-209ENST00000521559 DIAPH2O60879 1101 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 PEX11AO75192 247 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ALOX12BO75342 701 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 CREG1O75629 220 aa2.84□□□□□ -1.95
VPS13B-209ENST00000521559 ATP6AP2O75787 350 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms