RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MRPL45Q9BRJ2 306 aaKnown RBP3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 PYGO2Q9BRQ0 406 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 MFFQ9GZY8 342 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 EXO5Q9H790 373 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 ZDHHC11Q9H8X9 412 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 NEK6Q9HC98 313 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 STARD10Q9Y365 291 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 V9GY05 133 aa3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 CFAP65Q6ZU64 1925 aaKnown RBP3.91□□□□□ -1.78
HMGB1P46-201ENST00000520062 IGKV1D-8A0A087WSZ0 117 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 C9JVG2 144 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 TOM1O60784 492 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR7A10O76100 309 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 SNAPINO95295 136 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 SERPIND1P05546 499 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 KLK3P07288 261 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 TBPP20226 339 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 PSMB1P20618 241 aaKnown RBP3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 CHMLP26374 656 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 OTX1P32242 354 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 GPM6AP51674 278 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF45Q02386 682 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 TGM3Q08188 693 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 SPANXN2Q5MJ10 180 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 C1orf146Q5VVC0 180 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF774Q6NX45 483 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 FNDC5Q8NAU1 212 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR7G2Q8NG99 324 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR10H4Q8NGA5 316 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR10G3Q8NGC4 313 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR51S1Q8NGJ8 323 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 STMN2Q93045 179 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 MBOAT4Q96T53 435 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 CENPKQ9BS16 269 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 FAIM2Q9BWQ8 316 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 PTGES2Q9H7Z7 377 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 TMEM9Q9P0T7 183 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 BTNL2Q9UIR0 455 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 UGT2A1Q9Y4X1 527 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 FANCIQ9NVI1 1328 aa3.9□□□□□ -1.79
HMGB1P46-201ENST00000520062 MBTPS2O43462 519 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 PSTPIP1O43586 416 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 C1orf105O95561 183 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 CMA1P23946 247 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 IFNA8P32881 189 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 TNNT2P45379 298 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR3A4PP47883 348 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 DIO3P55073 304 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 TIGD3Q6B0B8 471 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 PRSS41Q7RTY9 318 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 P2RY8Q86VZ1 359 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 PLA2G4DQ86XP0 818 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 GTPBP8Q8N3Z3 284 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 TMEM252Q8N6L7 170 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR2AP1Q8NGE2 309 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 GPR151Q8TDV0 419 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 ELMO1Q92556 727 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 FGF11Q92914 225 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 NICN1Q9BSH3 213 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 MTG1Q9BT17 334 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 C20orf85Q9H1P6 137 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 SH2D2AQ9NP31 389 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 MARCH5Q9NX47 278 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 GIN1Q9NXP7 522 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 TREM2Q9NZC2 230 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 KIF25Q9UIL4 384 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 NUP50Q9UKX7 468 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 TTC21BQ7Z4L5 1316 aa3.89□□□□□ -1.79
HMGB1P46-201ENST00000520062 KLF18A0A0U1RQI7 1052 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 HSPB1P04792 205 aaKnown RBP3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 C2P06681 752 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF43P17038 809 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 PRDX3P30048 256 aaKnown RBP3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 HNRNPH3P31942 346 aaKnown RBP3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 SYKP43405 635 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 KLK7P49862 253 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 ACLYP53396 1101 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 CDH6P55285 790 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 DSCR10P59022 87 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 ERVK-25P63136 954 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 VPS26BQ4G0F5 336 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 MARCH8Q5T0T0 291 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 BZW1Q7L1Q6 419 aaKnown RBP3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 FAM220AQ7Z4H9 259 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 BIVMQ86UB2 503 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 FBXO16Q8IX29 292 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF100Q8IYN0 542 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 LYG1Q8N1E2 194 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 CD177Q8N6Q3 437 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 ACOT4Q8N9L9 421 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 NKAPP1Q8N9T2 125 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 BBS1Q8NFJ9 593 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR52I1Q8NGK6 324 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 TSEN15Q8WW01 171 aaKnown RBP3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 SLC38A4Q969I6 547 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 CMTM7Q96FZ5 175 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 ITCHQ96J02 903 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 TSNARE1Q96NA8 513 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 TGS1Q96RS0 853 aaKnown RBP3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 ARHGDIGQ99819 225 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms