RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 E9PLN8 166 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 KPNA4O00629 521 aaPredicted RBP8.48□□□□□ -1.05
CLN8-203ENST00000518780 CASQ2O14958 399 aaPredicted RBP8.48□□□□□ -1.05
CLN8-203ENST00000518780 CYTIPO60759 359 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 RCBTB2O95199 551 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 GASTP01350 101 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 OPN1LWP04000 364 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 SAGP10523 405 aaPredicted RBP8.48□□□□□ -1.05
CLN8-203ENST00000518780 CBLP22681 906 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 GRPRP30550 384 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 SLC16A1P53985 500 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 RPS4XP62701 263 aaKnown RBP8.48□□□□□ -1.05
CLN8-203ENST00000518780 TLE1Q04724 770 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 SLC34A1Q06495 639 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 LTBQ06643 244 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 PMS2P3Q13401 168 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 POU4F3Q15319 338 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 ZBED5Q49AG3 693 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 EMC4Q5J8M3 183 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 OTUD3Q5T2D3 398 aaPredicted RBP8.48□□□□□ -1.05
CLN8-203ENST00000518780 C1orf185Q5T7R7 199 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 TMEM225Q6GV28 225 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 HMBOX1Q6NT76 420 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 ZNF585AQ6P3V2 769 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 FAHD1Q6P587 224 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 B3GNT6Q6ZMB0 384 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 RASSF6Q6ZTQ3 369 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 FCRLAQ7L513 359 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 SLC46A3Q7Z3Q1 461 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 PXKQ7Z7A4 578 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 CD163Q86VB7 1156 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 P3H2Q8IVL5 708 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 PARP8Q8N3A8 854 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 PACRGLQ8N7B6 248 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 AQP11Q8NBQ7 271 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 OR5M9Q8NGP3 310 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 PFN4Q8NHR9 129 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 RNF128Q8TEB7 428 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 OXGR1Q96P68 337 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 FEVQ99581 238 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 RBM4BQ9BQ04 359 aaKnown RBP8.48□□□□□ -1.05
CLN8-203ENST00000518780 VKORC1Q9BQB6 163 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 RBM4Q9BWF3 364 aaKnown RBP8.48□□□□□ -1.05
CLN8-203ENST00000518780 C20orf141Q9NUB4 165 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 EMC3Q9P0I2 261 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 CLCF1Q9UBD9 225 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 OAZ3Q9UMX2 235 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 HIF3AQ9Y2N7 669 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 NOX1Q9Y5S8 564 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 PRRC2CQ9Y520 2896 aaKnown RBP8.48□□□□□ -1.05
CLN8-203ENST00000518780 BOD1L1Q8NFC6 3051 aa8.48□□□□□ -1.05
CLN8-203ENST00000518780 IGKV3D-15A0A087WSY6 115 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 A0A1W2PNV4 684 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 MBD3L4A6NDZ8 208 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 MBD3L3A6NE82 208 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 UNC119BA6NIH7 251 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 MBD3L5A6NJ08 208 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 ZNF724A8MTY0 619 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 H0YC42 278 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 M0R082 166 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 PLPP3O14495 311 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 SMAD9O15198 467 aaKnown RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 PTP4A3O75365 173 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 NDUFB2O95178 105 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 HPRP00739 348 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 IL2RAP01589 272 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 CDH2P19022 906 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 MAKP20794 623 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 FUT4P22083 530 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 CA7P43166 264 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 IST1P53990 364 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 TPD52P55327 224 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 PUDPQ08623 228 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 FOXD4Q12950 439 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 PON3Q15166 354 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 RFX4Q33E94 735 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 ABLIM2Q6H8Q1 611 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 ZBTB49Q6ZSB9 765 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 HDDC2Q7Z4H3 204 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 P4HA3Q7Z4N8 544 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 NANOGNBQ7Z5D8 188 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 TMEM179BQ7Z7N9 219 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 STK32CQ86UX6 486 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 MCEMP1Q8IX19 187 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 ATG16L2Q8NAA4 619 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 ICA1LQ8NDH6 482 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 ANKK1Q8NFD2 765 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 MBD3L2Q8NHZ7 208 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 ZNF417Q8TAU3 575 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 RELTQ969Z4 430 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 EME1Q96AY2 570 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 GMPPAQ96IJ6 420 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 FAM46AQ96IP4 442 aaKnown RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 MOGAT1Q96PD6 335 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 TRIB1Q96RU8 372 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 ZNF587Q96SQ5 575 aaPredicted RBP8.47□□□□□ -1.05
CLN8-203ENST00000518780 SRXN1Q9BYN0 137 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 UCK2Q9BZX2 261 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 SEMA6AQ9H2E6 1030 aa8.47□□□□□ -1.05
CLN8-203ENST00000518780 VCX3BQ9H321 246 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms