RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 SEC61A2Q9H9S3 476 aa8.42□□□□□ -1.06
SH2D4A-202ENST00000518040 ZDHHC2Q9UIJ5 367 aa8.42□□□□□ -1.06
SH2D4A-202ENST00000518040 WNK2Q9Y3S1 2297 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 A0A096LPE4 126 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 NPIPB8E9PQR5 432 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 SEC22BO75396 215 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 STX11O75558 287 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 GPIP06744 558 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 TCN1P20061 433 aaPredicted RBP8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 PRPH2P23942 346 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 RAD52P43351 418 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 MTNR1AP48039 350 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 CCT3P49368 545 aaKnown RBP8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 SERPINB9P50453 376 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 NAA20P61599 178 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 TUBA1BP68363 451 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 TUBA4AP68366 448 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 PCGF3Q3KNV8 242 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 ZNF385BQ569K4 471 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 FAM219BQ5XKK7 198 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 C16orf87Q6PH81 154 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 TUBA1AQ71U36 451 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 REC114Q7Z4M0 266 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 TMEM151AQ8N4L1 468 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 NATD1Q8N6N6 113 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 NOA1Q8NC60 698 aaKnown RBP8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 FAM71CQ8NEG0 241 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 C1orf147Q96MC9 270 aaPredicted RBP8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 TMEM237Q96Q45 408 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 ALKBH3Q96Q83 286 aaPredicted RBP8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 KCNA7Q96RP8 456 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 SDF2Q99470 211 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 SIRT3Q9NTG7 399 aaPredicted RBP8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 MID2Q9UJV3 735 aa8.41□□□□□ -1.06
SH2D4A-202ENST00000518040 RPL36A-HNRNPH2H7BZ11 118 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 PIN1P1O15428 100 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 RAD51CO43502 376 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 SKAP2O75563 359 aaPredicted RBP8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 INHBAP08476 426 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 CELA3BP08861 270 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 SBK3P0C264 359 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 RPL3P39023 403 aaKnown RBP8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 ALDH3B1P43353 468 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 SELENOVP59797 346 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 MVKQ03426 396 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 NPRL3Q12980 569 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 KIAA0040Q15053 153 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 SLC9A3R2Q15599 337 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 GPR68Q15743 365 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 TRMT5Q32P41 509 aaKnown RBP8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 TMEM225Q6GV28 225 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 GPAT4Q86UL3 456 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 PSMA8Q8TAA3 256 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 RAB1CQ92928 201 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 RAB8BQ92930 207 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 L3HYPDHQ96EM0 354 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 DNAJA3Q96EY1 480 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 RBM4BQ9BQ04 359 aaKnown RBP8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 RAB17Q9H0T7 212 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 NELFAQ9H3P2 528 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 MID1IP1Q9NPA3 183 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 EXOSC3Q9NQT5 275 aaKnown RBP8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 GPATCH2Q9NW75 528 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 C1orf109Q9NX04 203 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 ZNF69Q9UC07 566 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 DSPPQ9NZW4 1301 aa8.4□□□□□ -1.06
SH2D4A-202ENST00000518040 TMED7-TICAM2A0A0A6YYA0 188 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 AQP7P3A6NL99 342 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 CLDN25C9JDP6 229 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 AKAP10O43572 662 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 CRCPO75575 148 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 FOXH1O75593 365 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 UGT2B17O75795 530 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 ZNF432O94892 652 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 IMPDH2P12268 514 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 ATP5F1P24539 256 aaPredicted RBP8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 PGM1P36871 562 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 CRYBB2P43320 205 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 POLR2HP52434 150 aaKnown RBP8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 SEC24CP53992 1094 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 PLTPP55058 493 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 GALK2Q01415 458 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 ROR2Q01974 943 aaKnown RBP8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 SPDYE7PQ495Y7 208 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 GKAP1Q5VSY0 366 aaPredicted RBP8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 SPATC1Q76KD6 591 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 MYPOPQ86VE0 399 aaPredicted RBP8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 LCA5Q86VQ0 697 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 CMIPQ8IY22 773 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 SFXN5Q8TD22 340 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 ST7LQ8TDW4 575 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 OR7D2Q96RA2 312 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 SYT3Q9BQG1 590 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 MS4A7Q9GZW8 240 aaPredicted RBP8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 ACSS3Q9H6R3 686 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 NKIRAS2Q9NYR9 191 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 PRDM4Q9UKN5 801 aa8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 UTP11Q9Y3A2 253 aaKnown RBP8.4□□□□□ -1.07
SH2D4A-202ENST00000518040 TMED7Q9Y3B3 224 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms