RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 SYS1Q8N2H4 156 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CLIP4Q8N3C7 705 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MTURNQ8N3F0 131 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 METTL4Q8N3J2 472 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FGFRL1Q8N441 504 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LIX1Q8N485 282 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 BPIFB2Q8N4F0 458 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MARVELD2Q8N4S9 558 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 DHRSXQ8N5I4 330 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 KIR3DL3Q8N743 410 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM86B1Q8N7N1 296 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TPRX1Q8N7U7 411 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBMXL3Q8N7X1 1067 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TCEANCQ8N8B7 351 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MAPKAPK5-AS1Q8N8E1 139 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRR26Q8N8Z3 221 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRTM2Q8N967 370 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TTC29Q8NA56 475 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 KBTBD3Q8NAB2 608 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZSCAN4Q8NAM6 433 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYB561A3Q8NBI2 242 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CLEC18CQ8NCF0 446 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADAD2Q8NCV1 583 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF738Q8NE65 137 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 NOXO1Q8NFA2 376 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 B3GNT7Q8NFL0 401 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2T12Q8NG77 320 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2AK2Q8NG84 335 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR10H4Q8NGA5 316 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5T2Q8NGG2 359 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4D10Q8NGI6 311 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4D6Q8NGJ1 314 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR52I1Q8NGK6 324 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4A15Q8NGL6 344 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5M9Q8NGP3 310 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1J1Q8NGS3 322 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR6K6Q8NGW6 343 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR6K2Q8NGY2 324 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2L2Q8NH16 312 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5AK3PQ8NH89 298 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDC26Q8NHZ8 85 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 NUBPLQ8TB37 319 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 HMGCLL1Q8TB92 370 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ITFG1Q8TB96 612 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CNIH3Q8TBE1 160 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLPPR1Q8TBJ4 325 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ENKURQ8TC29 256 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LGALS14Q8TCE9 139 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPR148Q8TDV2 347 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF473Q8WTR7 871 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SETD7Q8WTS6 366 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC38A5Q8WUX1 472 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF133Q8WVZ7 376 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PCNPQ8WW12 178 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TCTEX1D2Q8WW35 142 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 HPSE2Q8WWQ2 592 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CACNG8Q8WXS5 425 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TM9SF4Q92544 642 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PIK3R3Q92569 461 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPS31Q92665 395 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDS1Q92903 461 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ART4Q93070 314 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MYDGFQ969H8 173 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ABTB1Q969K4 478 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSMG2Q969U7 264 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CPNE4Q96A23 557 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPL24Q96A35 216 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ISOC2Q96AB3 205 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM143Q96AN5 459 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C18orf25Q96B23 403 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TADA1Q96BN2 335 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OPTNQ96CV9 577 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OTUB2Q96DC9 234 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OMA1Q96E52 524 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC126Q96EE4 140 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZBED6CLQ96FA7 236 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SCMH1Q96GD3 660 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAHD2AQ96GK7 314 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TIMD4Q96H15 378 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CENPNQ96H22 339 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SMIM10Q96HG1 83 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PCED1BQ96HM7 432 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 NSL1Q96IY1 281 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CELF6Q96J87 481 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF170Q96K19 258 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 DNAJC1Q96KC8 554 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C4orf45Q96LM5 186 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C12orf42Q96LP6 360 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LINC00479Q96M42 142 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF641Q96N77 438 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RILPQ96NA2 401 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZFP3Q96NJ6 502 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SERPINB11Q96P15 392 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL17FQ96PD4 163 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RCHY1Q96PM5 261 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TSSK3Q96PN8 268 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 KCNA7Q96RP8 456 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CLCC1Q96S66 551 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FMO2Q99518 471 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LPAR4Q99677 370 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms