RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TPM1P09493 284 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 NCK1P16333 377 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 TNNI1P19237 187 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 LMO2P25791 158 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 PTBP1P26599 531 aaKnown RBP eCLIP2.49□□□□□ -2.01
HERC4-215ENST00000515753 NMT1P30419 496 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 CASP14P31944 242 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 RPL4P36578 427 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 FDFT1P37268 417 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 CDKN1BP46527 198 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 BRCC3P46736 316 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 DUSP3P51452 185 aaPredicted RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 NOVA1P51513 510 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 CRYBB1P53674 252 aaPredicted RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 ATP1B3P54709 279 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 PEX3P56589 373 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 RPS6P62753 249 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 RPS27AP62979 156 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 CD300CQ08708 224 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 RAB40BQ12829 278 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 MERTKQ12866 999 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 VGLL4Q14135 290 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 DOC2AQ14183 400 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 CRMP1Q14194 572 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 KNOP1Q1ED39 458 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 SLC5A12Q1EHB4 618 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 KLHL40Q2TBA0 621 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 AADACL4Q5VUY2 407 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 LIPNQ5VXI9 398 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 BAIAP2L2Q6UXY1 529 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 SSX9Q7RTT3 188 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 LUZP2Q86TE4 346 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 IFNEQ86WN2 208 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 C11orf53Q8IXP5 236 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 KATNAL2Q8IYT4 538 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 GTPBP8Q8N3Z3 284 aaPredicted RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 ALLCQ8N6M5 410 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 ZNF781Q8N8C0 355 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 BEST4Q8NFU0 473 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 CNIH3Q8TBE1 160 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 FAM151AQ8WW52 585 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 MAIP1Q8WWC4 291 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 IL1F10Q8WWZ1 152 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 EFHD2Q96C19 240 aaPredicted RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 RCHY1Q96PM5 261 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 SLC38A2Q96QD8 506 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 MTMR9Q96QG7 549 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 CENPKQ9BS16 269 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 TMEM121Q9BTD3 319 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 DNTTIP1Q9H147 329 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 NXF5Q9H1B4 397 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 XKR8Q9H6D3 395 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 NARFLQ9H6Q4 476 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 AZI2Q9H6S1 392 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 GEMIN7Q9H840 131 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 SP140LQ9H930 580 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 ELL3Q9HB65 397 aaPredicted RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 NT5MQ9NPB1 228 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 ESM1Q9NQ30 184 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 THYN1Q9P016 225 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 GCNT4Q9P109 453 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 CFAP45Q9UL16 551 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 MEMO1Q9Y316 297 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 COL4A5P29400 1685 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 BRCA1P38398 1863 aaKnown RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 RGPD2P0DJD1 1756 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 DLEC1Q9Y238 1755 aa2.49□□□□□ -2.01
HERC4-215ENST00000515753 RPAP1Q9BWH6 1393 aaPredicted RBP2.49□□□□□ -2.01
HERC4-215ENST00000515753 TIAM2Q8IVF5 1701 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 FER1L6Q2WGJ9 1857 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 SLX4Q8IY92 1834 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 IGHV3-16A0A0C4DH30 117 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 TRBV5-4A0A0C4DH59 114 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 TRBV11-1A0A0K0K1C0 115 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 IGLON5A6NGN9 336 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 OR2AG2A6NM03 316 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 HAS3O00219 553 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 TYROBPO43914 113 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 GALR3O60755 368 aaPredicted RBP2.48□□□□□ -2.01
HERC4-215ENST00000515753 RAMP3O60896 148 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 F10P00742 488 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 IGHG1P01857 330 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 IGHG4P01861 327 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 FTH1P02794 183 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 FCGR3AP08637 254 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 IGFBP1P08833 259 aaPredicted RBP2.48□□□□□ -2.01
HERC4-215ENST00000515753 SNRPCP09234 159 aaKnown RBP2.48□□□□□ -2.01
HERC4-215ENST00000515753 CCL5P13501 91 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 ATP1B2P14415 290 aaPredicted RBP2.48□□□□□ -2.01
HERC4-215ENST00000515753 ETS2P15036 469 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 CD1DP15813 335 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 PPP2R1BP30154 601 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 BDKRB1P46663 353 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 GNPDA1P46926 289 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 OR1G1P47890 313 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 STARP49675 285 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 ATP4BP51164 291 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 CDH6P55285 790 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 CLDN8P56748 225 aa2.48□□□□□ -2.01
HERC4-215ENST00000515753 CARD18P57730 90 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms