RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GASTP01350 101 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 FUT1P19526 365 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 UQCRC1P31930 480 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 MLLT10P55197 1068 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 NUP107P57740 925 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 PDK3Q15120 406 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 POU4F3Q15319 338 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 OR7A5Q15622 319 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 GXYLT1Q4G148 440 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 OGFRL1Q5TC84 451 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 KDM4DQ6B0I6 523 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 ABLIM2Q6H8Q1 611 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 RPL13AP3Q6NVV1 102 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 GFRALQ6UXV0 394 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 RASSF6Q6ZTQ3 369 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 H1FNTQ75WM6 255 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 STK32CQ86UX6 486 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 P3H2Q8IVL5 708 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 UBQLNLQ8IYU4 475 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 PARP8Q8N3A8 854 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 PACRGLQ8N7B6 248 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 AQP11Q8NBQ7 271 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 ICA1LQ8NDH6 482 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 OR9Q2Q8NGE9 314 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 OR5J2Q8NH18 312 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 SMPDL3BQ92485 455 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 SDCCAG3Q96C92 435 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 FAM46AQ96IP4 442 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 GPA33Q99795 319 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 RBM4BQ9BQ04 359 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 TUBA1CQ9BQE3 449 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 NAA11Q9BSU3 229 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 RBM4Q9BWF3 364 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 SF3B5Q9BWJ5 86 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 ASPNQ9BXN1 380 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 SRXN1Q9BYN0 137 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 CHST11Q9NPF2 352 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 IL20Q9NYY1 176 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 CLCF1Q9UBD9 225 aa10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 NKX1-2Q9UD57 310 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-220ENST00000514830 UNC119BA6NIH7 251 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 NPIPB13A6NJU9 1138 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 NPIPB4C9JG80 1138 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 H0YC42 278 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 M0R082 166 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 PRRG2O14669 202 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 SMAD9O15198 467 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 CXCL13O43927 109 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 CYTIPO60759 359 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 SLC19A2O60779 497 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 OPN1LWP04000 364 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 HIST1H2ABP04908 130 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ALPLP05186 524 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 SAGP10523 405 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 FCGR2AP12318 317 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ENPP1P22413 925 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 GTF2E2P29084 291 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 GRPRP30550 384 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 EIF1AXP47813 144 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 DAPP51397 102 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ALDH3A2P51648 485 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 SLC16A1P53985 500 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 TPD52P55327 224 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 OR2B6P58173 313 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 PRPS1P60891 318 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 DAG1Q14118 895 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ZBED5Q49AG3 693 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ACSF3Q4G176 576 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 NSUN5P2Q63ZY6 315 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 PPP4R4Q6NUP7 873 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 HIST3H2AQ7L7L0 130 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 CHMP1BQ7LBR1 199 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 OAFQ86UD1 273 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 HS3ST5Q8IZT8 346 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 GALNT11Q8NCW6 608 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ZNF417Q8TAU3 575 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 RNF128Q8TEB7 428 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 HIST1H2ACQ93077 130 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 WNT2BQ93097 391 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 EME1Q96AY2 570 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 RDH12Q96NR8 316 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 GPX7Q96SL4 187 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ZNF587Q96SQ5 575 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 CIB1Q99828 191 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 TP63Q9H3D4 680 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 RNF122Q9H9V4 155 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ZNF556Q9HAH1 456 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 PNPLA3Q9NST1 481 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 ENOPH1Q9UHY7 261 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 TMEFF2Q9UIK5 374 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 MCTS1Q9ULC4 181 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 RASD1Q9Y272 281 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 SIGLEC7Q9Y286 467 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 POFUT2Q9Y2G5 429 aa10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 MAGED1Q9Y5V3 778 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-220ENST00000514830 IGKV3D-15A0A087WSY6 115 aa10.7□□□□□ -0.7
PDLIM5-220ENST00000514830 SAC3D1A6NKF1 404 aa10.7□□□□□ -0.7
PDLIM5-220ENST00000514830 CLCA1A8K7I4 914 aa10.7□□□□□ -0.7
PDLIM5-220ENST00000514830 LRRN3E7EW58 273 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms