RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 XKP51811 444 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF136P52737 540 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 H2BFSP57053 126 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 NUMA1Q14980 2115 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ZIC1Q15915 447 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 C2orf68Q2NKX9 166 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 DHRS7BQ6IAN0 325 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 HIST3H2AQ7L7L0 130 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 RD3Q7Z3Z2 195 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CFAP206Q8IYR0 622 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 MMP21Q8N119 569 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 EXD3Q8N9H8 876 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SLC37A2Q8TED4 501 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 TFGQ92734 400 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 KAT2AQ92830 837 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 HIST1H2ACQ93077 130 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 MRGPRFQ96AM1 343 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SEMA4CQ9C0C4 833 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 INPP5EQ9NRR6 644 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ACSS1Q9NUB1 689 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 LRIT1Q9P2V4 623 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CARHSP1Q9Y2V2 147 aaKnown RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 U3KQA8 63 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 TLCD2A6NGC4 264 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ACOD1A6NK06 481 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 A6NLC8 198 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 B4DGG1 531 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ARHGEF9O43307 516 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SLC28A2O43868 658 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CRCPO75575 148 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 LRATO95237 230 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 OPN1SWP03999 348 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SNRNP70P08621 437 aaKnown RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 HIST1H2AGP0C0S8 130 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 RPA2P15927 270 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 HIST1H2ADP20671 130 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 AVPR1BP47901 424 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 RAB28P51157 221 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CYP4F2P78329 520 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 POU4F3Q15319 338 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CPSF6Q16630 551 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 GUCA2BQ16661 112 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 DECR1Q16698 335 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 DEFB133Q30KQ1 61 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 JMJD6Q6NYC1 403 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 NIPAL3Q6P499 406 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SFXN4Q6P4A7 337 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 PLET1Q6UQ28 207 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF620Q6ZNG0 422 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 GNPDA2Q8TDQ7 276 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 NR4A3Q92570 626 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CCDC74AQ96AQ1 378 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 RNFT2Q96EX2 444 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 C12orf66Q96MD2 445 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 HIST1H2AJQ99878 128 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SAP130Q9H0E3 1048 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 POLR2J3Q9H1A7 115 aaKnown RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CCDC86Q9H6F5 360 aaKnown RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 DDX31Q9H8H2 851 aaKnown RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SYNPO2LQ9H987 977 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ADGRL4Q9HBW9 690 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ACSL6Q9UKU0 697 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SLCO1B1Q9Y6L6 691 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CLCA3PQ9Y6N3 262 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 LAMA3Q16787 3333 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 COL27A1Q8IZC6 1860 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 IGHV1OR21-1A0A087WYE8 117 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 OR2AG2A6NM03 316 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TTLL8A6PVC2 850 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 RGS9O75916 674 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CHRM4P08173 479 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 NT5EP21589 574 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 DRD5P21918 477 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TRHRP34981 398 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 TAGLN2P37802 199 aaKnown RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 PMELP40967 661 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 RPS7P62081 194 aaKnown RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 MC1RQ01726 317 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 HSF2Q03933 536 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 PYHIN1Q6K0P9 492 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ARSKQ6UWY0 536 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 SLITRK4Q8IW52 837 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 PM20D2Q8IYS1 436 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 DEFB124Q8NES8 71 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 OR56B4Q8NH76 319 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 LRRC20Q8TCA0 184 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF431Q8TF32 576 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 NEIL2Q969S2 332 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 GTPBP3Q969Y2 492 aaKnown RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 LRR1Q96L50 414 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 PKP4Q99569 1192 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 CCDC3Q9BQI4 270 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 DDA1Q9BW61 102 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 UCKL1Q9NWZ5 548 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 ADAM29Q9UKF5 820 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 D6RAR5 112 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 PLPP1O14494 284 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 PIN1P1O15428 100 aa6.77□□□□□ -1.33
CLIP1-205ENST00000514271 PRICKLE3O43900 615 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-205ENST00000514271 MT-CO3P00414 261 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms