RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 FAM32AQ9Y421 112 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 PCNX1Q96RV3 2341 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 FASNP49327 2511 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 A0A087WUU8 490 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 TCRBV3S1A0A5B6 114 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 CLEC18AA5D8T8 446 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 EEF1E1-BLOC1S5C9J1V9 151 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 EEF1E1O43324 174 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 CYTIPO60759 359 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 SERPINI2O75830 405 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 TNFSF13O75888 250 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 PLGP00747 810 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 HOXD4P09016 255 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 UMPSP11172 480 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 FCGR2AP12318 317 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 IFI30P13284 250 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 RHCEP18577 417 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 AGTR1P30556 359 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 TIMP3P35625 211 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 MAGEA2P43356 314 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 CLK1P49759 484 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 P2RY4P51582 365 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 IST1P53990 364 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 SLC35A1P78382 337 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 IL1RL1Q01638 556 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 RASGEF1BQ0VAM2 473 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 KPNB1Q14974 876 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 TRAM2Q15035 370 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 SF3B4Q15427 424 aaKnown RBP eCLIP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF74Q16587 644 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 EXOC3L2Q2M3D2 409 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 FAM69AQ5T7M9 428 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 PODNL1Q6PEZ8 512 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 CLEC18BQ6UXF7 455 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF730Q6ZMV8 503 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 NUFIP2Q7Z417 695 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 MCEMP1Q8IX19 187 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 TUSC5Q8IXB3 177 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 CLEC18CQ8NCF0 446 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 MFSD8Q8NHS3 518 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 SLC7A13Q8TCU3 470 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 SSC4DQ8WTU2 575 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 MPP4Q96JB8 637 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 EPYCQ99645 322 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 PSD2Q9BQI7 771 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 CHID1Q9BWS9 393 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 POLR2J2Q9GZM3 115 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 POLR2J3Q9H1A7 115 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 OPN3Q9H1Y3 402 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 MAGIXQ9H6Y5 334 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 IL1RAPQ9NPH3 570 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 PAQR5Q9NXK6 330 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 ING1Q9UK53 422 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 MED31Q9Y3C7 131 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 U3KQV3 271 aa8.73□□□□□ -1.01
TOPBP1-209ENST00000513818 AQP7P3A6NL99 342 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF716A6NP11 495 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 SS18L1O75177 396 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 FKBP6O75344 327 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 TIPRLO75663 272 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 RCBTB2O95199 551 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 GADD45GO95257 159 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 HPRP00739 348 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 RAP2AP10114 183 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 THRBP10828 461 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 HLA-DOBP13765 273 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 NQO1P15559 274 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 ITGA2P17301 1181 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 MAKP20794 623 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 CHRNB4P30926 498 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 IFNA8P32881 189 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 RBM34P42696 430 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 KIR2DL2P43627 348 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 MAP2K6P52564 334 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 SMSP52788 366 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 H3F3AP84243 136 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 GUSBP1Q15486 140 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 EEF1A1P5Q5VTE0 462 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 OR2A2Q6IF42 318 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 PAQR6Q6TCH4 344 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 BTLAQ7Z6A9 289 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 LUZP2Q86TE4 346 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 GPAT4Q86UL3 456 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 OR9Q2Q8NGE9 314 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 OR13C2Q8NGS9 318 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 ACOT11Q8WXI4 607 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 SGTBQ96EQ0 304 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 FAM46AQ96IP4 442 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 DHRS1Q96LJ7 313 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF385AQ96PM9 386 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 MMADHCQ9H3L0 296 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 CHST11Q9NPF2 352 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 COQ3Q9NZJ6 369 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 KLHL9Q9P2J3 617 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 TRAPPC4Q9Y296 219 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 ADGRG4Q8IZF6 3080 aa8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 INTS1Q8N201 2190 aaKnown RBP8.72□□□□□ -1.01
TOPBP1-209ENST00000513818 LRRK2Q5S007 2527 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 TRAV27A0A087WT01 109 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms