RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CFHR5Q9BXR6 569 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 P2RY12Q9H244 342 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 SEC61A2Q9H9S3 476 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 PELI2Q9HAT8 420 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 V9GYH0 126 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 LAMB2P55268 1798 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 SOD1P00441 154 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 GAAP10253 952 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 ALDH3B1P43353 468 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 PXNP49023 591 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 RIDAP52758 137 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 COL9A2Q14055 689 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 VASNQ6EMK4 673 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 PARS2Q7L3T8 475 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 VRK2Q86Y07 508 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 OR52I2Q8NH67 350 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 APH1BQ8WW43 257 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 SPHK1Q9NYA1 384 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 SNRPGP15A8MWD9 76 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 RBMXL2O75526 392 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 CSTAP01040 98 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 FGF9P31371 208 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 UBE2IP63279 158 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 EIF2S3LQ2VIR3 472 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 OR10K2Q6IF99 312 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 LRFN4Q6PJG9 635 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 DPPA4Q7L190 304 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 PLXDC1Q8IUK5 500 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 CMIPQ8IY22 773 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 OR4Q3Q8NH05 313 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 DAZLQ92904 295 aaKnown RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 FGF20Q9NP95 211 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-211ENST00000513346 CYSLTR2Q9NS75 346 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 FLVCR2Q9UPI3 526 aa10.45□□□□□ -0.74
TCOF1-211ENST00000513346 OR2F2O95006 317 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 SLC34A2O95436 690 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 PGFP49763 221 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR2F1Q13607 317 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 NNATQ16517 81 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 FIGNL1Q6PIW4 674 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 TTLL10Q6ZVT0 673 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF761Q86XN6 746 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-211ENST00000513346 KLHDC8AQ8IYD2 350 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 SUMF2Q8NBJ7 301 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR6T1Q8NGN1 323 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR5AR1Q8NGP9 310 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 SPPL3Q8TCT6 385 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 MSLNLQ96KJ4 702 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 APOOQ9BUR5 198 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 DEFB126Q9BYW3 111 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 USP36Q9P275 1121 aaKnown RBP10.44□□□□□ -0.74
TCOF1-211ENST00000513346 LOXHD1Q8IVV2 1947 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 NPIPA5E9PKD4 350 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 SLC6A11P48066 632 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 ARF3P61204 181 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-211ENST00000513346 ARF1P84077 181 aaKnown RBP10.44□□□□□ -0.74
TCOF1-211ENST00000513346 TDGQ13569 410 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 RPE65Q16518 533 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR5M10Q6IEU7 315 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 P4HA3Q7Z4N8 544 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 CD163Q86VB7 1156 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 IL22RA1Q8N6P7 574 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 TMEM121BQ9BXQ6 578 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-211ENST00000513346 HRASLSQ9HDD0 168 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 SLC6A13Q9NSD5 602 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF225Q9UK10 706 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 NPIPA1Q9UND3 350 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 ATG4BQ9Y4P1 393 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 TSPAN11A1L157 253 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 FAM171A2A8MVW0 826 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 H3BNC9 293 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 FBXO24O75426 580 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 RGS11O94810 467 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 CSTBP04080 98 aaKnown RBP10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR2T7P0C7T2 308 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 NR2C1P13056 603 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 FPR3P25089 353 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 MC3RP41968 323 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 GLP1RP43220 463 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 SOX9P48436 509 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF41P51814 821 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-211ENST00000513346 STEAP1BQ6NZ63 245 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 LNX2Q8N448 690 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR13C3Q8NGS6 347 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR5H2Q8NGV7 314 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR6N1Q8NGY5 312 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR2T27Q8NH04 317 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF480Q8WV37 535 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 PMM1Q92871 262 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 OR14A2Q96R54 314 aa10.44□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF593O00488 134 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 SEC14L5O43304 696 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 HCRTR2O43614 444 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 TIMP2P16035 220 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 FBLP22087 321 aaKnown RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 CDK2P24941 298 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 RAG2P55895 527 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 ADAM5Q6NVV9 412 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 LPCAT3Q6P1A2 487 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 RBM45Q8IUH3 476 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms